Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00331 ATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTACTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCTTGGGAATTAGCAGAGAAATCATTTTTACCAAGTAGAGATCCAGAGTGGTATTTTTTTGGACCCCGGGATAGGAAATACCCGAATGGGTTTAGAACAAATAGAGCAACTCGTGCAGGGTACTGGAAGTCCACTGGAAAAGACAGAAGAGTTTCCTGCCAAAGCAGACCCATTGGCATGAAGAAGACTTTAGTGTACTATAGAGGCAGAGCTCCTCAAGGGATCAGAACTGATTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAATGTGAGGACACCACCGGATTACAGTCAGGTCATGATGATTATGGCATGGAATTTAGCAATGAAGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGTTCTGAGATTGAAGAGCAAGGACAATGTAGTATATCACTAATTGAGAGCTCCCAAACCATAATTAATGAGTGTGAAACCATGTCTCCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACTGAAGATGCATGGTATTCTTCTAATGCAGCTATGGTTGGTGGTGAAGAACTCTCACATGTTACATTTACAAACTAA 753 0.4157 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQSGHDDYGMEFSNEDTYALCRVFKKNGICSEIEEQGQCSISLIESSQTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGEELSHVTFTN* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00331 250 FunFam Nac domain-containing protein 86 15 172 - -
Lapu4g00331 250 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 200 - -
Lapu4g00331 250 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lapu4g00331 250 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Lapu4g00331 250 Gene3D NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
Lapu4g00331 250 ProSiteProfiles NAC domain profile. 6 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00331 Lapu-Chr4 3418110 3421761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00331 1 239 NAC Transcription Factor Family AT3G17730 72.835 6.99e-130 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu4g00331 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00331 - - gmx:100784495 489.189