Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00321 ATGGCTAATTTTGAAAATGTTGAGCTCCAGATGTCAGAAGAAACAGATGCACAACCATATCATGAAACTTTGCATTCTAAATTTCCAAAGCTTTTATCCAGGAAACAAAGTGCATCAGTTTCTATTCCTATGGAGTCATATGAGGGAGAAAGTAGTGTCGTGGGACATAGTGGTTCATTATATACCACACCAGAAATTGATAATCTTATGCAGCATAGTATAGTTATAACAGGAAACAAAACAGAGGAGAGCAAGATAGATGAATTTTCTACTTTCGACAGCATGGCTTCAAAGTACAGGAATAAAAGCTATGATAGCATAAATGAGCATTTACTGAGATCTGGGAAACTGGGAATTTGTAATGACCCTTATTGTACTACTTGTCCTACTTACTTCAAGTCTTCTCAGCTAAGAAATCCAAAAGCTTGGAATATACCTGATCCGAAGTTTCAGAATGCTCTTTATGGGGATGCCAAAGGTTTCGCTAGAAAACTTTTTTCTTTATGTTCATCTTTTGTTCCTGGAGTTATGAATCCTCACTCTAAATTCATACAACATTGGAACAAGGTTCTTGCCAGTTTTTGCTTGGTTGCAATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTTCAGCAGGATCATAATTGTATAGCTATCAACTGGAAATTGACAAAAGCACTTGTTATAGTTAGAAGCATGAATGATTTCATGTATTTCCTTCACATTCTTCTCCAGTTTAGGTTGGCTTTTGTTTCTCCTGAGTCGAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCAAAGAGAATTGCACTTCATTACCTGAAGGGTTATTTTCTTATTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGTTGTTGTCTGTCCTACCAAAATCCTTGAGGGGAGCAAATTATGCTAAGAATGTTCTGCGTGCAGCGATCCTAGTGCAGTATATTCCCAGATTATTCAGATTTCTGCCTATGCTGTTTGGTCAGTCTCCAGCAGGATTCATATTTGAGTCAGCATGGGCAAATTTCATTATAAATCTTCTAATTTTCATACTAGCTAGCCATGTTGTTGGCTCTAGCTGGTACTTATTTGCTCTACAGAGGGTTAATCAATGCTTTCGAAATGCGTGCCATAATGCTAATATCACTGGATGCCTGACATTCATCGATTGTGGACATAGCCATGTTGGAAACAATCAGCATGGCTTATCATCAAACCAGTGGAACAACCATGCGGATGCTATTGCATGTTGGAATTCCTCTTCCAGTGATTCTTTTGCTTATGGGATTTATGCTCATGCTGTACCTCTTACTACACAAACAGACATGGTCACCAAATACATATATGCTCTATTTTGGGGATTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCAAGCAATTTTGTGTTTGAAGCCCTTTTTACTATGGCCATCATGGGATTGGGACTTTTGCTTTTTGCTCTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTGGGACGGAGGAGGCTAGAAATGCAACTTAGACGCGGTGATGTTGAGCAATGGATGAGTCATCGGCGCTTGCCAGAATTCCTCAGAAGGAGAGTACGAGAGGCTGAACGGTATAGTTGGACTGCAACAAGGGGGGTGAATGAAGCAATGATAATGGAGAATTTTCCAGAAGAACTCCAAGTGGATATAAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATATTTGCTCTGATGGATGAACCTATCTTAGATGCCATTTGTGCGAGACTAAGACAAACTACTTACATTAAAGGAAGTAAAATTTTGAGTCACTGTACTGTGGTAGAGAAGATGGTATTCGTGGTGCGTGGTAAATTGGAGAGCATTGGAGATGATGGAATTAGAATTCCTTTATCTGAAGGGGATGCTTGTGGTGAAGAACTCTTGACATGGTATCTTGAGCATTCTTCTGTCAGCGCAGACGGCAGAAGAGTAAGGCTTCCAGGACAGAAGTTGCTTAGCAACAGGACAGTAAGATGCTTAACAAATGTGGAAGCACTTTCACTCCGAGCAGCAAACCTTGAAGAAGTCACGATCCTTTTCACAAGATTCTTTCGTAGTTCACGTGTTCAAGGAGCCTTAAGGTATGAATCACCCTATTGGAGATCCCTTGCAGCAATCCGCATTCAGGTTGCATGGAGATACAGAAAGCAACGACTAAGTCAAGCTAATTCCAAACTTTCAAATTAA 2256 0.3963 MANFENVELQMSEETDAQPYHETLHSKFPKLLSRKQSASVSIPMESYEGESSVVGHSGSLYTTPEIDNLMQHSIVITGNKTEESKIDEFSTFDSMASKYRNKSYDSINEHLLRSGKLGICNDPYCTTCPTYFKSSQLRNPKAWNIPDPKFQNALYGDAKGFARKLFSLCSSFVPGVMNPHSKFIQHWNKVLASFCLVAIFVDPLFFFLLYVQQDHNCIAINWKLTKALVIVRSMNDFMYFLHILLQFRLAFVSPESRVVGAGDLVDHPKRIALHYLKGYFLIDLFVVFPLPQIMLLSVLPKSLRGANYAKNVLRAAILVQYIPRLFRFLPMLFGQSPAGFIFESAWANFIINLLIFILASHVVGSSWYLFALQRVNQCFRNACHNANITGCLTFIDCGHSHVGNNQHGLSSNQWNNHADAIACWNSSSSDSFAYGIYAHAVPLTTQTDMVTKYIYALFWGLQQISTLAGNQTPSNFVFEALFTMAIMGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRRGDVEQWMSHRRLPEFLRRRVREAERYSWTATRGVNEAMIMENFPEELQVDIRRHLFKFVKKVRIFALMDEPILDAICARLRQTTYIKGSKILSHCTVVEKMVFVVRGKLESIGDDGIRIPLSEGDACGEELLTWYLEHSSVSADGRRVRLPGQKLLSNRTVRCLTNVEALSLRAANLEEVTILFTRFFRSSRVQGALRYESPYWRSLAAIRIQVAWRYRKQRLSQANSKLSN* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00321 751 Gene3D Helix hairpin bin 510 575 - -
Lapu4g00321 751 SUPERFAMILY Voltage-gated potassium channels 179 511 - -
Lapu4g00321 751 MobiDBLite consensus disorder prediction 1 20 - -
Lapu4g00321 751 Pfam Ion transport protein 189 510 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu4g00321 751 MobiDBLite consensus disorder prediction 1 17 - -
Lapu4g00321 751 SUPERFAMILY cAMP-binding domain-like 511 702 IPR018490 -
Lapu4g00321 751 CDD CAP_ED 583 699 IPR000595 -
Lapu4g00321 751 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 120 744 - -
Lapu4g00321 751 Gene3D - 189 507 - -
Lapu4g00321 751 Gene3D Jelly Rolls 581 705 IPR014710 -
Lapu4g00321 751 ProSiteProfiles cAMP/cGMP binding motif profile. 583 651 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00321 Lapu-Chr4 3277403 3283430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00321 5 661 Ion Channels AT3G17700 56.029 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00321 K05391 - gsj:114390051 1273.07