Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00314 ATGAATGCTTCAATGAGGAAAAAAGTTCAAAGGAAGTGTAAGATAAGAGGTTACAACCTCAAAGTCGATGCTCTCGACGAGATCCTCTCCTTCGCCTCTCGCTTCGAAGGCAACGAGGACGAAGCCGTCGATCTCCTTCTCGACGAGCTCGAAAAATATCTGAAATCCACAATAATCGACAAGGAGACAGTGGACCGCGCGGTGAGCCTGCTGCTGGAAGCTGAGGCGGCCGTGGACGATTGCTCCGATCCCGGCGCCGGTACCTCTTCCGCCATTCGCGTTGTCGATGCCTTCCTCGTCCCGAAGTATAAATACGACACCATTAGAAAGCAGTTCTACGAGCATACAGGCACCTTGCCTATTCACGGAGAAGCATCAGCAAAAGCAGCTTTGTACAGGGATAGGTTTCTTTTATTGTCCCAGAGGCTTTCTCGTGACCAGCATTTTTCGAAACCTGCTTTTGAATCTGAATTTTCTCATTTCGGGAGTTGCGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACAGGAAGAAGATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGTCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATTAACTTGTCCAATGCAATATCCTTTAGTGTTTTGAGAATAATTTCTTGTATTTATTTTCAATACAAGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTTGTCGAAGGGGAGATGCTCGTGGAGGGTACTTTTCAGGTCTTAACATGTGGATTTCCTCCATTGGAGGATAGGGATAAGACACTGAAAGTACTAGCAGGGCATGACTTTTTTGGTGGTGGTACTTTTACTAAAGAGGAAACTATTAGACTGGAAGAGATGGAGAAAAGAGCAGTAAATGACATGTTTGTCATACTTTCTGATGTTTGGCTAGACAATGAAGAGCTTGATGCAATCTTGATGCTGTTTTTCCTAGAGAAGGCTTTGACAAAGCTTGAGACTGTTCTGGATGGTTTTGAGACTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAGGCCATGTAACCTTTCATTTGATTCTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACAAGGCTGAAAGAGCAGAGTCAATTTCTGTTTATTCCAGGTCCTGATGATGCAGATCCTTCAACGGTTCTTCCTATGTGCGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATACCCAATGCCATATTTTCAAGCAACCCTTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTTTGATGTCTCCTTGTACAGAAGAAACGGATGATCTTTTTCAGCATCTTGTGGCTACCATAACCCATCAAAGTCATCTCTGTCCACTCCCCCTAACTGTTCAACCTATCATTTGGAATTATGATCATTGTCTTTATCTTTATCCAACTCCACACACGATAGTTTTGGGTGACAAAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACTGGTTCATTCTCAATTGACAGCACATTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAG 1668 0.4305 MNASMRKKVQRKCKIRGYNLKVDALDEILSFASRFEGNEDEAVDLLLDELEKYLKSTIIDKETVDRAVSLLLEAEAAVDDCSDPGAGTSSAIRVVDAFLVPKYKYDTIRKQFYEHTGTLPIHGEASAKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAVKINLSNAISFSVLRIISCIYFQYKITTGLFSENTIVVVEGEMLVEGTFQVLTCGFPPLEDRDKTLKVLAGHDFFGGGTFTKEETIRLEEMEKRAVNDMFVILSDVWLDNEELDAILMLFFLEKALTKLETVLDGFETVEVVPSLFVFMGNFCSRPCNLSFDSYSSLRMQFGKLGEMIAAHTRLKEQSQFLFIPGPDDADPSTVLPMCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPCTEETDDLFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDKSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00314 555 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 1 555 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lapu4g00314 555 PIRSF DNA_pol_epsilon_2 1 555 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lapu4g00314 555 Gene3D - 2 69 - -
Lapu4g00314 555 Pfam DNA polymerase alpha/epsilon subunit B 301 518 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00314 16 512 Core DNA Replication Machinery Family AT5G22110 66.064 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00314 K02325 - gmx:100784116 876.315