Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00310 ATGGCAGACACGAATTCAGTTGAAGTGATTTTGGATTTTCTGAGGAGGAATAGGTTCACCCGAGCTGAGGCGGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCTTGCAGAAGCTTACATTGGAAGAAAAGGACTCGCGTTGTGGGTTGCAGAATGATAAGGGGAAGCCTGTAGTAGAAAATCACGGGTTGGATTCTCGTGACGGTATTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAATGTGGGACTGGTAGAAATGCTGCAGAAGAAAGCAAATGGAAAACTGTTGCTCCCACAGGGGAAAGGAATAAATCTAGTGAAGTGGTTGGAACGAGTGAAAAAAACTTTACTTTCTCGAAGAGTTCGGAGGACAGTGTTCTTGATTTGTACTCATGGAAATTTAATCTCAGCAATGGTCCTGTGGAGCCTTACCAAAACGATAGTGGAAGTAGGCCTAATAATGCTTTGAAGGCCCCGGTATCTCAACAATCAAAGTATCAAACTGGTGAAGCTCCTGATGCAACCAACAGTAATGTGAAATCTGGGGAGGCAAATAATGTACCTGCCGAAAAAACAACCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCAAAGTATGACCTTATGCATAACAAAGAACCTAAGGAACTTGATCTGCATCTCAAATTAAGTACTTCATCTCTTAAAGAGAACTTGACAGATAATCACTTGTCAAGAACTGATGAGAATGTGAATTCGTCTACAAATATATGGAAAGATTGTTCGGTCAAGACTGTTTTCCCTTTCTCAAAGGGAGATATATCTACAAGCTACAACGGTTCAACTTATTCTGACAGACAAGAGGAGAAGAGAAGAGCAGAAAACAGTGATGTTATGACATCAATAAAAGAGCAAGTGGACGAAGTTGGAAGAGCTCTTTACTTAGGAAAGTTGCAAGGCAGTTCCGGCAGCTTAAGTTTTCCTCTTGCAATGGAGAATCAAAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAGAATCAAGTCAGAAGATAAGCCCTTGGCTTTTAATTGGGGAGATAAGTTTGAGTGTGATGGACTGCCTGTGAAACTCGCTGGTGCTGACAACTCCTTACTTATTGGGTCATATTTGGATGTCCCTATTGGACAAGACATTAAAACTACAGGTGTGAGGAAGGCTATAGGGGGCAGTTGGCTGTCTGTAAGTCAAGGGATTTCAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGAGATGGGTTAAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGAAGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCCAGTGACAATGAAAAGGGGACGGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAAGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCTGGTGAGCAATATATTCTACCAAAAAATGTTGAGCCGGTCACTTCAGATGATCCTATTGGTCTAACAATTACTGAAATATATGGAAGAACCAATGGTAATGACGCAATGACTCAATATGATACACAACTGATGGATGTGGAAGAACTGAATCTGATGCATATGGAACCTGTCAGGCAGGGATTTGTCACTCACCAAAATGATCTCATCATGCTAGGAGATGGAAAGGTTCTGAATCATATTGCGAGGCCACAAATTGAGGACATGGAAGATGATCAGCATGGTTCAGTTAGATCAATTGGAGTTGGGATCAACAGTGATGCTGCTGATATTGGTAGTGAAGTGCATGGAAGTTTGATTGGTGGTAGTAGTGAGGGGGATTTAGAATATTTCCGTGATCACGATACTGTGCACAGTGGCTCCAAACACACTCATCAGGATTTAAACAAGAGTTCTGGTAACAAATCAGTAAAAAATAATAAGAAAAATGACAAGAATGAATCAAATAAATATGTCATAGAAAGTGACAAAGATGCATGCTCACAGATAAAAACTCATATTGATGGGAACTTTTCATTTCCTCAATCTCTTAGAGATGGCCACGTGGTTCAGGCTGGCTCCAGTAAGTCACTATGGTCGAGTAATTGTAATGTAGATGAAACAGATGACTGTCTTAATGCCTTTGTGGGCTCTGATGACATGCTTTCTACTTGGAGGCGGAAGAGTAGTGATTCTTCGCCTGTTAAAAGTTCTAGGGATGAGAATAATGCTATTGTGGTAAGATCCAGAAACTCTTCTCCAACCACAGTTTCGAATTATGGGTATACTGATGGAGAGCATGTCAAGATAGAAAAGGATGAAAAGATAAGTGTTGTGAGGGAAGATGATATAGGTGCATCACTAGAGGATGAAGAGGCTGCTGCTGTGCAAGAGCAGGTGAGGCAAATAAAGGCTCAAGAGGAGGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGAAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTATTAGCTGGGCGCTATCATGTCACCGAATATCTTGGATCTGCTGCATTCAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTTCCACCTTCTAAGATTGTATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAACTGCTTAAAGCCAACTTATATGAGTTTCACAAATTTAATCGAGAATCAGGGGGGGAAGTGTATTTCACAATGCCAAGGTTGCAGTCAATCACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGTCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAAGTGAAGGTCATTGATCTCGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGATCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCCCCTGCAACATTACTAGCTCGGGTGATCGGGATCATTGGACCAGTTGATCAAAGTTTACTTGCCAAAGGACGGGATACATATAAATACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTGGAATACCTGATTCCCAAAAAGACATCATTGAGGCATAGATTACCTATGGGAGACCAAGGTTTTATCGACTTTGTTGCTCATTTGCTCGATGTTAACCCAAAGAAGCGACCTTCTGCATCCGAGGCCCTGAAGCATCCATGGTTATCATACCCTTATGAACCAATATCATCTTAA 3537 0.4066 MADTNSVEVILDFLRRNRFTRAEAALRSELSNCSDVNGFLQKLTLEEKDSRCGLQNDKGKPVVENHGLDSRDGIEVSKELIVKEIECGTGRNAAEESKWKTVAPTGERNKSSEVVGTSEKNFTFSKSSEDSVLDLYSWKFNLSNGPVEPYQNDSGSRPNNALKAPVSQQSKYQTGEAPDATNSNVKSGEANNVPAEKTTLWLGSSGKASTEPKYDLMHNKEPKELDLHLKLSTSSLKENLTDNHLSRTDENVNSSTNIWKDCSVKTVFPFSKGDISTSYNGSTYSDRQEEKRRAENSDVMTSIKEQVDEVGRALYLGKLQGSSGSLSFPLAMENQKEEFPRLPPVRIKSEDKPLAFNWGDKFECDGLPVKLAGADNSLLIGSYLDVPIGQDIKTTGVRKAIGGSWLSVSQGISEDTSDLVSGFATIGDGLSESVDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEEDDQSFAEEDSYFSGEQYILPKNVEPVTSDDPIGLTITEIYGRTNGNDAMTQYDTQLMDVEELNLMHMEPVRQGFVTHQNDLIMLGDGKVLNHIARPQIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLIGGSSEGDLEYFRDHDTVHSGSKHTHQDLNKSSGNKSVKNNKKNDKNESNKYVIESDKDACSQIKTHIDGNFSFPQSLRDGHVVQAGSSKSLWSSNCNVDETDDCLNAFVGSDDMLSTWRRKSSDSSPVKSSRDENNAIVVRSRNSSPTTVSNYGYTDGEHVKIEKDEKISVVREDDIGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKFHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPVDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLDVNPKKRPSASEALKHPWLSYPYEPISS* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00310 1178 Gene3D Transferase(Phosphotransferase) domain 1 921 1169 - -
Lapu4g00310 1178 SMART serkin_6 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00310 1178 FunFam Putative serine/threonine-protein kinase dyrk2 861 948 - -
Lapu4g00310 1178 CDD PKc_DYRK_like 867 1169 - -
Lapu4g00310 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 667 681 - -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 747 766 - -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 149 206 - -
Lapu4g00310 1178 Gene3D Phosphorylase Kinase; domain 1 861 948 - -
Lapu4g00310 1178 FunFam Serine/threonine-protein kinase ppk15 946 1170 - -
Lapu4g00310 1178 ProSiteProfiles Protein kinase domain profile. 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 750 766 - -
Lapu4g00310 1178 Coils Coil 819 839 - -
Lapu4g00310 1178 Pfam Protein kinase domain 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00310 1178 SUPERFAMILY Protein kinase-like (PK-like) 856 1171 IPR011009 -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 149 212 - -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 647 681 - -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 472 505 - -
Lapu4g00310 1178 PANTHER DUAL SPECIFICITY PROTEIN KINASE 415 1169 - -
Lapu4g00310 1178 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00310 Lapu-Chr4 3169632 3178043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00310 866 1164 MAP Kinase Gene Family AT5G19010 31.034 1.43e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lapu4g00310 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00310 - - gmx:100786225 2130.52