Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00300 ATGGATGGTGATAATGGTCTTAACATTCGTAATTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGCCTGCAGCTGATGTCTTCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCGGTTTTATCTGGCAGTAATGGGGCATTTCACCATAGGGACATTGGTATGCCCCAAGCTACGTACCCTGTGGAATACATGAGGGACGCTTGGATCAGTAGTCAGAGAGACAAGTATATGAACATGATACCTACAAACCATAACTATGGTGGTATTCCGGAAACTTCTTCAGCACATCAAATTCAAATGATTCCACCACCGGAATTGCCGAAGGAAGAAAGGCCGGTGGAAGAGGAACCTGTTGTTGAGAAGGCAACTGGTGGCACTCGTAAGAAAAGACAGGGGCCAAAGGTGCCCAAATCTCCCAAGGCCAAGAAGTCCAAGAGGGGGCCTCGTGTGCCAAAGAACGAGAATGCTCCCACAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGAATTGACATGGATATTTCTAGTATTCCAATTCCTGTTTGTTCATGCACTGGAGCACCTCAACAGTGTTACAGGTGGGGTTCTGGTGGTTGGCAGTCTGCATGTTGCACGACAGGCATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4624 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGSNGAFHHRDIGMPQATYPVEYMRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEERPVEEEPVVEKATGGTRKKRQGPKVPKSPKAKKSKRGPRVPKNENAPTVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00300 283 SMART GAGA_bind_2 1 283 IPR010409 -
Lapu4g00300 283 MobiDBLite consensus disorder prediction 109 173 - -
Lapu4g00300 283 MobiDBLite consensus disorder prediction 135 154 - -
Lapu4g00300 283 MobiDBLite consensus disorder prediction 114 134 - -
Lapu4g00300 283 PANTHER - 1 283 IPR010409 -
Lapu4g00300 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00300 Lapu-Chr4 3050839 3053323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00300 1 283 BBR or BPC Transcription factor family AT2G01930 52.703 5.23e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lapu4g00300 GAGA_bind 7.8e-110 No_clan