Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00282 ATGGCCCTCGTCCGCCACCGCCGCCAACCCAATCTCCGTCTTCCCCTCCCGGAGTCCTCAGAGCGCCGCCCTCGCTTCCCGCTCCCCCTCCCTCCCTCCGCTGCCAAACCCGTTGCCGGAGACGCAATCACCGCCACCGACTTCGAGAAACTCGCCGTGCTCGGCCACGGCAACGGCGGCACCGTCTACAAAGTCCGCCACAAGACCACCTCCGCCACCTACGCGCTCAAAATCATCCACAGCAACGCCGACGCCACCACGCGCCGCCGCGCGTTCTCGGAAACCTCCATCCTCCGCCGCGCCACCGACTGCCCCCACGTCGTCCGCTTCCACGGCTCCTTCGAGAAGCCCTCCGGCGACGTGGCCATAGTCATGGAGTACATGGACAGCGGCACCCTCGAGACCGCCCTTGCCACCGGCGGCACGTTTTCTGAAGAGCGACTTGCCAAGGTGGCGCGTGACATCCTGGAAGGACTGGCATGCCTCCACGCACGCAACATCGCACACCGCGATATTAAACCAGCAAACATTCTAGTAAACTCTGAGGGAGAAGTGAAGATCGCTGACTTTGGAGTCAGCAAACTCATGTGCCGCACGCTCGAAGCCTGCAACTCCTACGTGGGCACGTGTGCGTACATGAGTCCCGAACGCTTCAACCCAGAAGCATCTGACGGGAACTATAATGGTTTTGCCGGAGATATTTGGAGTTTGGGTTTGACCCTTTTTGAACTCTATGTAGGTTACTTTCCTTTTCTTGAATCGGGTCAACGACCCGATTGGGCTACTCTTATATGTGCCATCTGTTATGGAGACCCGCCGAGCCTTCCCGAGACAGCTTCATCGGAGTTTCGTAGTTTCATGGAGTCCTGCCTCAAGAAGCAGTCCAATGATAGGTGGACGGCGGCGCAACTCTTGAACCATCCGTTTGTGAGCAAAAAGTCAGAAACTCAGTGA 954 0.5849 MALVRHRRQPNLRLPLPESSERRPRFPLPLPPSAAKPVAGDAITATDFEKLAVLGHGNGGTVYKVRHKTTSATYALKIIHSNADATTRRRAFSETSILRRATDCPHVVRFHGSFEKPSGDVAIVMEYMDSGTLETALATGGTFSEERLAKVARDILEGLACLHARNIAHRDIKPANILVNSEGEVKIADFGVSKLMCRTLEACNSYVGTCAYMSPERFNPEASDGNYNGFAGDIWSLGLTLFELYVGYFPFLESGQRPDWATLICAICYGDPPSLPETASSEFRSFMESCLKKQSNDRWTAAQLLNHPFVSKKSETQ* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00282 317 FunFam Dual specificity mitogen-activated protein kinase kinase 36 128 - -
Lapu4g00282 317 MobiDBLite consensus disorder prediction 1 33 - -
Lapu4g00282 317 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 42 316 - -
Lapu4g00282 317 ProSiteProfiles Protein kinase domain profile. 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00282 317 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Lapu4g00282 317 CDD PKc_MAPKK_plant_like 47 312 - -
Lapu4g00282 317 Gene3D Transferase(Phosphotransferase) domain 1 124 317 - -
Lapu4g00282 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lapu4g00282 317 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Lapu4g00282 317 FunFam Mitogen-activated protein kinase 2 130 317 - -
Lapu4g00282 317 Gene3D Phosphorylase Kinase; domain 1 39 123 - -
Lapu4g00282 317 Pfam Protein kinase domain 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00282 317 SMART serkin_6 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00282 Lapu-Chr4 2881956 2883232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00282 1 310 MAP Kinase Kinase Gene Family AT1G73500 60.256 3.22e-127 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lapu4g00282 Pkinase 2.4e-64 CL0016