Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00279 ATGGAATCTGAGAGGCCTAACACTACTATTGAGACCTACAAACAACAACAAGAACTGGTAGAAGAAGATGATGATGATGATGAAGAAGAAGAAGAAAACAATGAGATTCTCAAGAGAAGAATCTCCAGCCACCCTCTCTATGGATTGCTGGTTGAAGCTCACCTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGAGAGCTGAAGATAGATCAGATGCAAGCAACAGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTTGGGAAGCTTAAAGAAGCAATGGTGGAACCACAGCAGAAGTCCATGGCTTTCATAAACAACATGCATTCACAACTGAGGGAGATCACAAAGCCAACCTTGGCTGCACCACCTTCTGAACCTGCACCACCTTCTGCATCTTCTAGTGACTGCAAATTCAGAACAAATTAA 474 0.4346 MESERPNTTIETYKQQQELVEEDDDDDEEEEENNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQATEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLREITKPTLAAPPSEPAPPSASSSDCKFRTN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00279 157 Pfam KNOX2 domain 89 131 IPR005541 GO:0003677|GO:0005634
Lapu4g00279 157 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 17 132 - -
Lapu4g00279 157 Coils Coil 63 83 - -
Lapu4g00279 157 MobiDBLite consensus disorder prediction 130 157 - -
Lapu4g00279 157 MobiDBLite consensus disorder prediction 18 32 - -
Lapu4g00279 157 Pfam KNOX1 domain 37 61 IPR005540 GO:0003677|GO:0005634
Lapu4g00279 157 SMART KNOX2_2 81 132 IPR005541 GO:0003677|GO:0005634
Lapu4g00279 157 SMART KNOX1_2 35 81 IPR005540 GO:0003677|GO:0005634
Lapu4g00279 157 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00279 Lapu-Chr4 2854472 2859202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00279 35 127 Homeobox Transcription Factor Family AT4G08150 38.000 1.90e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00279 - - gsj:114367439 228.024