Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00273 ATGTGTTTCAGTCCACGCTGCAGCTTCTGCTACATCTTCTCTACAATCTACACCCTTATGTTCATGTTCATACTTTCCTTGATCCTCTTCTGGATAATCATATCTCCTTCAAGTGTCAAGTTCCATGTAACTGATGCCTCTCTAACACAGTTCAACCTCACAAGCAACAACACCTTGTATTACAACTTCAAGGTCAATGTCACAGTGAGAAACCCCAACAACAACATCATAGTGTACTATAGGAGGATCACAGCAATAGCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAACTTAACACCCTTTGACCAAGGCCACAAGAACACCACCTTCCTTCAAGCAGTCTTTGCAGGGCAGAGGGTGATTAAGCTCAAATCTAAACAACTTGGTGAGTATAAAGAGGAGGCAAATGTTGGGATTCACAAGGACTTAGCTGTGGATTTTGATCTCAGAATCAGAGCCAAGTATGCAAGGTTCAAGAGTAGTCGTTTCAATCCACCCATTGTTCAGTGTCGTCGCTTGAGAGTTCCTTTGATTTCTAGTGGGAAATCAGCACCTCCTTTTAGCGTCAGCAGATGCAGCAGTGCCTATTTCTTTTCGGATCGTGATGCTGATGCATAG 621 0.43 MCFSPRCSFCYIFSTIYTLMFMFILSLILFWIIISPSSVKFHVTDASLTQFNLTSNNTLYYNFKVNVTVRNPNNNIIVYYRRITAIAWYKDNAFGWVNLTPFDQGHKNTTFLQAVFAGQRVIKLKSKQLGEYKEEANVGIHKDLAVDFDLRIRAKYARFKSSRFNPPIVQCRRLRVPLISSGKSAPPFSVSRCSSAYFFSDRDADA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00273 206 PANTHER OS05G0367900 PROTEIN 6 178 IPR044839 GO:0098542
Lapu4g00273 206 Pfam Late embryogenesis abundant protein 66 161 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00273 Lapu-Chr4 2772553 2773178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00273 33 178 SNARE and Associated Proteins AT1G32270 31.293 1.42e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00273 - - gmx:100784278 372.859