Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00272 ATGTGTTGCAGAAACCGCTGTATCGGCTGCATTTGCTGCACAATCATCACCCTCATATTCATGTTCATAGTTTCCTCAATCATCTTCTGGATAATCATCTCTCCATCAAATGTGAAATTCCATGTAACTGATGCCTCCCTCACACAACTCAACCTCACAAACAACAACACCTTGTATTACAACTTCAAAGTCAACGTCACAGTGAGAAACCCCAACAACAACATCGTTGTGTACTATAGAAGGATCAAAGCGATAGCTTGGTACAAAGACAATGATTTTGGTCGGGTAAATTTAACACCCTTTGACCAAGGCCACAAGAACTCCACCGTCCTTCAAGTATTGTTTGAAGGGCAAAGTGTGCTTAAGCTCAAACCTAAACAACTTGGTGAGTATAAAGAAGAGACAAGTGTCGGGGTTTACAATGACATGGCTGTGGATTTTGATCTAAGAATCAGAGCCAAGTTTGGAAGGTTCAAGAGTAGTCGTTTCGATCCTCCCATTGTTCAGTGTCGGCGTTTGAGTGTTCCTTTGATTTCTAAGGGTAAACCATCACCTCCTTTTAGTGTCGCTAACTGTAGAATTGGTCGTTCTTTCTTTGTTGATCGTGATGCTGAAGCTGCATGA 624 0.4183 MCCRNRCIGCICCTIITLIFMFIVSSIIFWIIISPSNVKFHVTDASLTQLNLTNNNTLYYNFKVNVTVRNPNNNIVVYYRRIKAIAWYKDNDFGRVNLTPFDQGHKNSTVLQVLFEGQSVLKLKPKQLGEYKEETSVGVYNDMAVDFDLRIRAKFGRFKSSRFDPPIVQCRRLSVPLISKGKPSPPFSVANCRIGRSFFVDRDAEAA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00272 207 PANTHER OS05G0367900 PROTEIN 8 175 IPR044839 GO:0098542
Lapu4g00272 207 Pfam Late embryogenesis abundant protein 65 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00272 Lapu-Chr4 2768713 2769336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00272 32 151 SNARE and Associated Proteins AT1G32270 33.058 7.48e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00272 - - gmx:100783747 308.916