Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00269 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAAAAATCCGATTCCTCTAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCCTCCAATTCCCCTTCCAGATCCGATAAGAAGAAGGCTAAATCCGCTGCTCATCCAACTCTAGCCGCCGGAGGCGGCGGTGGAAGTGCTAGTAGCGGCGGTGGCGTAGGTCTTGCTGCGTGCCGTCAGACGCAGGTGAAGGACGGAACCAAGAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGATGCTCGCAAGGAATCTCCGGCGAAGAAGTTGACGGCAGCGGAGGGACGGGAATCGTCGGCGTCGGTGTCGCCGATTCTAGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAAGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGGACGACGGCGCTCGGTGGCAGCAACCTCTCCCGGCCTGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAGGCGGCGAGCCAGAACAGGGTCGGGTTTCGTGAGGGTTCCCGTGGCGGTGCTGCTGCCGGGGGTTGGGGCGATAACGGGAGCAGTTCTGACAGCGTGTCGACCTCGGGGAGCATGCCGTCAAGGGAGCAGAGTCCGGTGGTGTTGCCTCGTTCGCGGTTGCAGAACGGAGAATCATCCTCTGAAGCCGCAGGCAAGCAGGCATCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACAGCATATGACTTTGAAAACCCCAAGGAGTCTGAATCTCCTCGTTTTCAAGCCATATTACGTGTCACTAGTGCACCTAGAAAGAGATTTCCTTCGGATATAAAAAGTTTTTCGCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATCAGGGCAAAATTTGATAAAGCAAAGGAAGATGTGAACTCTGATCTAGCCATTTTTGCGGCTGATCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACTATCGAGGACTTGCTAGTTTTGGCAAGGAGCTGTGCTATGACTTCATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCAGGAATGCTAAAGCAGCTTCACACCCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCTAGTGCTGCAAAGACCTTAAAGCCTTCATCAAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCTGAAAATCTTTCCCTTCCTGCTGATGACGACAATACAAAACACTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCATCAGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAATCTTCCAAGGCATCAAATAATAAGAGATTCCCTTCTGATGTGGATCTCTCTACTGCTAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAATTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGATTGAGTGTCAATGAGCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCATGTTCACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTCAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTGGACTGTTTCCCCGAAACTGATAATTCTGCTTTTATGGATGACCTAAAAGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACTACATCATCTGCAGGGAGCGTGACTCCAAGGTCACCTTTGATGACTCCACGGACAAGTCAGATCGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAGCTTGCTGATATAGCTCGATGTGTGGCAAATGCACCTCTCGATGATGATCACACCACTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGACCGAAGGAAATTTGACGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGTTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACCGTTGATGATGATGTTCTTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGCCCAATCCATTCGTCAAGGGATCGTACCTCTATTGATGACTTTGAAATTATAAAACCTATTAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACATGTCGTGAGAACTTATATCTTGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGCCTAGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTGCATGTGGTTCATCGAGATTTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAAGAAGATGACACTGATGTTTTTACATCTGAGGATCAATGGGAAAGGAGGAAGAAACGCTCCGCAGTGGGCACGCCTGATTACTTAGCCCCGGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTGATTTTGTTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCATCCTCAGAATATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACTGAAGATCCTAATCAAAGACTGGGATCAAAAGGCGCTTCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCAAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTGAGTGGCAGCAGTAGTTGCTTGAGTAATCGTCAAGATGAAGTGGGAGATGAATGCGGGGGTCTTGCTGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTCAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCTATCAACTATGATCTCACTAAAGGATGGAAAGATGACCCGCCAACGAATTCTAGTGCATAG 3906 0.457 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGGGGSASSGGGVGLAACRQTQVKDGTKKKDVVKGKESQTPPPDARKESPAKKLTAAEGRESSASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEAASQNRVGFREGSRGGAAAGGWGDNGSSSDSVSTSGSMPSREQSPVVLPRSRLQNGESSSEAAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKTLKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSGRDRMASWKKFPSPSGKSPKEAAQLKDQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCSQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSVTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANAPLDDDHTTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEEDDTDVFTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQNIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYQASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00269 1301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672|GO:0006468
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 199 251 - -
Lapu4g00269 1301 Gene3D Transferase(Phosphotransferase) domain 1 973 1197 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 9 32 - -
Lapu4g00269 1301 Pfam Protein kinase domain 889 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00269 1301 SMART serkin_6 889 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00269 1301 CDD STKc_MAST_like 895 1184 - -
Lapu4g00269 1301 Coils Coil 317 337 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 659 689 - -
Lapu4g00269 1301 FunFam probable serine/threonine protein kinase IREH1 887 976 - -
Lapu4g00269 1301 PANTHER SERINE/THREONINE-PROTEIN KINASE 590 1273 - -
Lapu4g00269 1301 Gene3D Phosphorylase Kinase; domain 1 887 1208 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 111 130 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 461 484 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 544 562 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 659 698 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 454 566 - -
Lapu4g00269 1301 ProSiteProfiles Protein kinase domain profile. 889 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 504 520 - -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 1 253 - -
Lapu4g00269 1301 ProSiteProfiles AGC-kinase C-terminal domain profile. 1180 1284 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu4g00269 1301 SUPERFAMILY Protein kinase-like (PK-like) 886 1216 IPR011009 -
Lapu4g00269 1301 MobiDBLite consensus disorder prediction 74 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00269 Lapu-Chr4 2730827 2746542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00269 1 1295 AGC Kinase Gene Family AT3G17850 65.865 0.0 1618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lapu4g00269 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00269 - - gmx:100816852 2238.38