Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00250 ATGCTTCCTCCCTCACGACGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTGATTAAGGCAAATGATGATCTTAGCCCTGAGCACTATCAATTTTTCTTGTACCAACTTCTTAGAGGCCTGAAATTTATACACACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTCGGACTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACAGACTATGTTGCAACCCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATATATGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGGAAGCCATTGTTTCCGGGAAAAAATGTAGTGCACCAATTGGATCTCATAACTGACTTGCTTGGTACTCCTCCTGCTGAAACCATTTCTAAGATTCGAAACGAGAAGGCTAGAAGGTACCTTGGTAGCATGAGGAAAAAGCAACCTATTCCATTCACCAAAAAATTTCCAAATGCAGATCCATTGGGTCTTCATTTGCTGGAACGATTACTTTCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCTCTAAGTGACCCTTATTTCCATGGTTTGTCAAATGTGGACCGTGAACCGTCCACTCAACCCATTTCAAAGCTCGAGTTTGAGTTTGAGAGGAGAAAATTGACCAAGGATGATGTTAGAGAGTTGATTTATCGTGAGATTTTAGAGTATCATCCTCAGATGCTCCAAGAATATCTTCGTGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAGCATTCTGGCAAAGGTGAACGAGGCACTCCATTGCTGAGGCACCATGCCTCCTTGCCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAAAATAATCAAAACGATGATGTTGAAAAGCCAACTGGAGCAGTTGATGTGACAGATTCTGAAAATCCAGATGCACAAAACGGATCCTCCAGGCCAAATTGCAGCGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAATGTATAGATGTCAAACAAAAAAAAGAAGATCAAGAGGAGGAACCACCTACAGAGGTCACTGATGAGACTCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATGCCTAG 1254 0.4266 MLPPSRREFRDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPAETISKIRNEKARRYLGSMRKKQPIPFTKKFPNADPLGLHLLERLLSFDPKDRPAAEEALSDPYFHGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHSGKGERGTPLLRHHASLPRERVPAPKDENNQNDDVEKPTGAVDVTDSENPDAQNGSSRPNCSARSLLKSASISGSKCIDVKQKKEDQEEEPPTEVTDETLDELTQKVASLHA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00250 417 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00250 417 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 278 - -
Lapu4g00250 417 SUPERFAMILY Protein kinase-like (PK-like) 9 231 IPR011009 -
Lapu4g00250 417 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Lapu4g00250 417 MobiDBLite consensus disorder prediction 320 371 - -
Lapu4g00250 417 MobiDBLite consensus disorder prediction 384 405 - -
Lapu4g00250 417 FunFam Mitogen-activated protein kinase 250 272 - -
Lapu4g00250 417 MobiDBLite consensus disorder prediction 320 339 - -
Lapu4g00250 417 Pfam Protein kinase domain 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00250 417 MobiDBLite consensus disorder prediction 351 371 - -
Lapu4g00250 417 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00250 417 FunFam Mitogen-activated protein kinase 21 249 - -
Lapu4g00250 417 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00250 Lapu-Chr4 2511641 2515761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00250 1 417 MAP Kinase Gene Family AT3G18040 79.108 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lapu4g00250 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00250 - - gmx:100787677 751.51