Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00248 ATGAAGAACCTTCTTAAGAAGCTTCATATCATGTCTAACCGATCAGAGAATGAACAAGGGTCTTCTTCGTCCAAGGGCAGCAAGTCCAATCTAGGTTCATCTTCATCTTCCAAGAAGATTTTGCGCTCAAAGTCCACTCAAAGTTCTGAGCAAAAGCCCTTATCTGGGTTCTCCACTTGGTTGTCTTCAGTTGCTAATAGGCAGAGTCCTAGTCCTCCTCCATCTTTGACCCAGGCAAGGGGCGAGAGAATGGAGCTATCTGATGCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCAGATTCAGCCAGGCTTGATTCAGGGTCTAGTGCTTCCAGGGATCCTGAAGTGGAGGAAGAGTATCAGATACAGCTGGCTTTAGAGCTGAGTGCAAAGGAGGACCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGGTTATACACCAGCTGAACTTGTGGCCTACCGGTATTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTACGATCTTTATGGGAGCTTAACCGAGTCAAACCCTACAAGAATGCCTTCCCTTGTAGATTTGCAACTGCAAGGAACATCAATCTCAGGTGGTACGTGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCGAATTTGTTGAAACTTGTGCAAAAGGCTCAGGAGTTGACTGGCAAATCAAGTTCTGATTTTGAAGTTGTAGATAGCAATTTGGTTCGCAAGCTTGCAATATTTGTGGCTGACTATATGGGTGGACAAGTTGGAGATCCTGAAAGTATGACAAGAGCATGGAGGAGTCTTAGTTATAGTCTCAAAGCAACCCTTGGTAGCATGTTTTTGCCACTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATGTCGGTTGGTGAAGGGGCTGCAATATACAAGTTCCGATTATGTGGCAATAAACTTTGTAAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCTGGAACCCTTATTCCATCTGATGCAACTGGATCTCAGATAGAGTGCGATGAATCTTCGTATGTGGCCAGTCCTTCATCAAGAGACCTTGATTCCTCACATGTAGCATCATCCAGCAGTGGTGTTGGAAGTTCATATGAAGAAACTTTGGATTTGGGGATGTTGGACAAAGGAAACAGATCAAAACATTTTCCCCATACAGGTAAAGAATCTGATGTAAGCAAGCCCTCTATGGGAAAGGAAGAATCAATGAGACCCTTGAATGAATTTAAAAGCCCTCACAATGTTGAGAAGATCCCAGAGCAGGAAGCTCCTGGCAGACCTAATCATCCACATGTACATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCTCCTGCAGTACGTAGGATGAAAGTCAAAGATGTTTCTCTATACATGATTGATGCTGCGAAGGAGAACCCTCACTTAGCCCAGAGACTTCATGACGTTTTACTTGAAAGTGGTGTGGTTGCTCCTCCAAATCTATTTTCTGAAATTTACGATGATGACTCAGGTTCCTCAACTGAGGCCAACTTTCCAACAGAAGAAAAAGATGAAAATAAGCAGGGAAGTGGACAGAAAGAAGCTGAGCTTGATGGTAATCTTTGTCATGCTCGACTTTTGCCTCCTTTGGCTCACAGTAGAGTCCAGAACAGAGCAAGTTCTAGTGGTCAGGTGGAGCATTCTAAACCTGTAGAAGGTTTAGGAATCAACCTTCCTCTGTATACAAGGGAACCAGTTGTACAGCATATACCAACTCAGGTAAAATATGGACAAAATGTTCCAGTTGCCGCTGCTGCAGCTGCTGCTGCCGCCGTTGTTGCATCTTCTATGGTAGTTGCGGTGGCAAAATCTAACATTGACTCAAACATAGATCTTCCAGCAGCAGCTGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTCAGTAAACAGTATGAACAAGGCAGTCGAAGTGATGGAGATACAGACAGTGCTGGTTATGACCTGAAGGGTAGCGGTGATGGAGAACATATAGCTTTAGGAGCAAATTCAGAAGGTGAAAGAAGATCTGATAGATCAGTAGTAAGTAATGATAGCACAAAATCTGATTCTGCATTAGATGATCATGATGTTGCTGAGGTTGACATTCCATGGGAGGAAATCTCGGTCGGTGAGCGTATCGGACTTGGATCATATGGGGAGGTGTATCGTGGTGAATGGCGTGGAACTGAAGTTGCTGTAAAGAGGTTTCTAGACCAAGATATATCTGGTGAATCACTTGAAGAGTTCAAAACTGAAGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGACCTCCAAATCTTTCGATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTACTTCATAGACCAAACAGTCAATTAGATGAGAGAAGGCGTTTGAAGATGGCTATTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGGGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGGATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGCTCCCGAGGTGTTGAGAAATGAACCTTCAAATGAGAAGTGTGATGTATATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGTGGAATGAATCCAATGCAGGTTGTTGGTGCTGTGGGTTTCCAGCATCGCCGTCTTGACATTCCTGATGATGTGGACCCTACTATAGCAGATATTATCAGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCTACATTTGTTGAAATATTGGCGGCTCTGAAGCCATTACAGAAGACAATGATTGGTTCTCAAGTACCTCGACCAAGTGCATCGGGGAAGCATGAGAAGGGTCAGTCATCGCGTGTTATAGAAGACCCAGCAAGATAG 3111 0.4413 MKNLLKKLHIMSNRSENEQGSSSSKGSKSNLGSSSSSKKILRSKSTQSSEQKPLSGFSTWLSSVANRQSPSPPPSLTQARGERMELSDAVSSGGLDVVSDSARLDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPGYTPAELVAYRYWNYNALGYDDKILDGFYDLYGSLTESNPTRMPSLVDLQLQGTSISGGTWEAVLVNRAADSNLLKLVQKAQELTGKSSSDFEVVDSNLVRKLAIFVADYMGGQVGDPESMTRAWRSLSYSLKATLGSMFLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYTSSDYVAINFVKIDDGREYIVDLMADPGTLIPSDATGSQIECDESSYVASPSSRDLDSSHVASSSSGVGSSYEETLDLGMLDKGNRSKHFPHTGKESDVSKPSMGKEESMRPLNEFKSPHNVEKIPEQEAPGRPNHPHVHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPHLAQRLHDVLLESGVVAPPNLFSEIYDDDSGSSTEANFPTEEKDENKQGSGQKEAELDGNLCHARLLPPLAHSRVQNRASSSGQVEHSKPVEGLGINLPLYTREPVVQHIPTQVKYGQNVPVAAAAAAAAAVVASSMVVAVAKSNIDSNIDLPAAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYDLKGSGDGEHIALGANSEGERRSDRSVVSNDSTKSDSALDDHDVAEVDIPWEEISVGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLLHRPNSQLDERRRLKMAIDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIADIIRKCWQTDPKLRPTFVEILAALKPLQKTMIGSQVPRPSASGKHEKGQSSRVIEDPAR* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 1 118 - -
Lapu4g00248 1036 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 79 1006 - -
Lapu4g00248 1036 FunFam Serine/threonine-protein kinase isoform 1 740 827 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 371 401 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 542 556 - -
Lapu4g00248 1036 CDD STKc_MAP3K-like 755 1001 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 709 736 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 14 76 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 455 478 - -
Lapu4g00248 1036 PRINTS Tyrosine kinase catalytic domain signature 862 880 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 PRINTS Tyrosine kinase catalytic domain signature 909 919 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 PRINTS Tyrosine kinase catalytic domain signature 928 950 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 PRINTS Tyrosine kinase catalytic domain signature 972 994 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 PRINTS Tyrosine kinase catalytic domain signature 823 836 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 678 736 - -
Lapu4g00248 1036 SMART serkin_6 749 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00248 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 868 880 IPR008271 GO:0004672|GO:0006468
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 1009 1036 - -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 408 440 - -
Lapu4g00248 1036 Gene3D Phosphorylase Kinase; domain 1 742 826 - -
Lapu4g00248 1036 SUPERFAMILY Protein kinase-like (PK-like) 734 1000 IPR011009 -
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 371 440 - -
Lapu4g00248 1036 Pfam Protein tyrosine and serine/threonine kinase 750 1000 IPR001245 GO:0004672|GO:0006468
Lapu4g00248 1036 MobiDBLite consensus disorder prediction 530 558 - -
Lapu4g00248 1036 ProSiteProfiles Protein kinase domain profile. 749 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00248 1036 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Lapu4g00248 1036 Gene3D Transferase(Phosphotransferase) domain 1 828 1012 - -
Lapu4g00248 1036 ProSitePatterns Protein kinases ATP-binding region signature. 755 776 IPR017441 GO:0005524
Lapu4g00248 1036 FunFam Serine/threonine-protein kinase CTR1 828 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00248 Lapu-Chr4 2458985 2469940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00248 1 1019 MAP Kinase Kinase Kinase AT1G73660 62.585 0.0 1147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lapu4g00248 PK_Tyr_Ser-Thr 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00248 - - vra:106769971 1814.28