Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00244 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAATATGGTTGATCATTCTTTGAGTGGAAGGAAACTCAGGCCTCTCATGCCAAGGCCAATGACTTCTCCTGACACTGCACCACCAACAACCACTCTTAGCTTAACTCACCCCCATGGCAATGATTTTCCTTCACACTATGATTATCACCATCTTGAACAAAACAAGAGAGAGCAGTTCAATGGTACAGCACCCGTTGTGGTTAGCACAAGGTGGAATCCAACCCGAGAGCAACTAAGAGCCCTTGAAGAGTTGTATAGAAGAGGAACAAGGACACCATCTGCTGAGCAAATCCAACATATCACTGCACAACTTAGAAGGTTTGGTAACATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGGAAAGGCAAAAGCGTCGCCGCCAAATGGAATCAGATGCTGAAACTCCTGAGAAGAAAGATTCAGCTGCAAGTAGGGCAGTGTTTGAAGTTAAACAGACCAAGAATTGGACACCCTCAACAAACTGCAGTACTATTGCAGAGGAATCTGTTTCAACACAGAGGACTGCAAAAGCAGTGGCTGTAGAGAGTAGAACAGTTGGATGGCTCCAATTCGATGAAGGGGAATTGCAACAAAGAAGAAACCTTTTGGAGAGGAATGCAACGTGGCAAGTGATGCAGTTACCCTGTCCTTCTCCTGTTGCACCTGTCACACACCTCATAAACAGCCCTCCTAATGCCTCTTCAGCTATTAGTATGGCCACTACAACAACCACAGTAACAACAAGAAAAATGGACCCAAACCTCATTAAGACACATGATCTCAGCTTTTTTATTTCACCCCAGAGGGAAAACAGTGTTATCTACTTAAGCAGTAGTAGTAGTACTAGTGAAGATGATAACTGTGTGGAGTCTCAAACCCTTCAATTTTTCCCATTAAGGAGTGGTGATGCTAGCAGTGACAAAATGAGGGATAAAGAGACAGAGATATCAGCTTCAGCAATGAATTGCAATAACTTGACCCCAAGCCAGTTTTTTGAGTTCCTTCCTATGAAGGAGTAA 1071 0.436 MWMVGYNEGGEFNMVDHSLSGRKLRPLMPRPMTSPDTAPPTTTLSLTHPHGNDFPSHYDYHHLEQNKREQFNGTAPVVVSTRWNPTREQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMESDAETPEKKDSAASRAVFEVKQTKNWTPSTNCSTIAEESVSTQRTAKAVAVESRTVGWLQFDEGELQQRRNLLERNATWQVMQLPCPSPVAPVTHLINSPPNASSAISMATTTTTVTTRKMDPNLIKTHDLSFFISPQRENSVIYLSSSSSTSEDDNCVESQTLQFFPLRSGDASSDKMRDKETEISASAMNCNNLTPSQFFEFLPMKE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00244 356 MobiDBLite consensus disorder prediction 142 161 - -
Lapu4g00244 356 Gene3D - 79 141 - -
Lapu4g00244 356 FunFam WUSCHEL-related homeobox 4 80 147 - -
Lapu4g00244 356 CDD homeodomain 81 142 IPR001356 GO:0003677
Lapu4g00244 356 SUPERFAMILY Homeodomain-like 81 146 IPR009057 -
Lapu4g00244 356 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Lapu4g00244 356 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Lapu4g00244 356 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 64 351 IPR044555 GO:0003700|GO:0099402
Lapu4g00244 356 MobiDBLite consensus disorder prediction 138 161 - -
Lapu4g00244 356 SMART HOX_1 78 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00244 Lapu-Chr4 2435485 2437639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00244 1 355 Wox Gene Family AT3G18010 39.433 3.81e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu4g00244 Homeodomain 2.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00244 - - gmx:100819541 575.089