Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00231 ATGGCTACTCTTGTGACAGAGAAAGTGAAGCTTCTTGTGGCATTACTTACCCTGCAGCTCTGCTTTGCAGGATATCACATTGTGTCTAGACTTGCACTAAATATTGGTGTCAGCCAAGTTGTTTACCCCGTTTATCGAAATTTGATTGCTTTGCTTTTGTTAAGCCCATTTGCTTATGTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTGGTTCAGTTCTTCCTACTTGCATTACTGGGGATCACTGCAAACCAGGGGTTTTACTTGTTGGGATTATACTATGCTTCTCCAACCTTTGCTTCTGCATTGCAAAACTCAGTTCCCGCGATCACTTTTGTCTTGGCCTTGGCTTTAAGGCTTGAGGAAGCCAACATCACAAGGAAAGATGGATTGGCAAAAGTTCTTGGAACCATTGCCAGTGTGGGGGGTGCCACAGTAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCGAACACAAGGAGACACTTTAAAAGTAGATCAGTCAGCGAAAGCGCAAAATTGGACTTGGGGTTGCATATACTTGCTTGGACATTGTCTGTCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTAACCCTCACTTCGTTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGCAGAAGATGACTTGGAAAATTGGAAGATACAGTCAGTAGAGGAGCTTTTTATTATCCTATATGCTGGAATTATAGCATCTGGTGTTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTCCAGCCTGTGCAAACTATTCTGGTTGCTTTCATGGCAGCCTTAATTCTTGGTGATCAGTTATACTCTGGAGGGCTTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGCAAAAACAATGAAAGAAAAGTGATCGAGTCATCATCACTAACAAACCGTTTGCTTATTAAGGCAGAGGAAGAGAATAAAGATATTGATGCAGCTCCCAAAGACATACCATGA 1086 0.4236 MATLVTEKVKLLVALLTLQLCFAGYHIVSRLALNIGVSQVVYPVYRNLIALLLLSPFAYVLEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEANITRKDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDRTQGDTLKVDQSAKAQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAEDDLENWKIQSVEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAFMAALILGDQLYSGGLIGAILIVLGLYLVLWGKNNERKVIESSSLTNRLLIKAEEENKDIDAAPKDIP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00231 361 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Lapu4g00231 361 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020
Lapu4g00231 361 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Lapu4g00231 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
Lapu4g00231 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00231 Lapu-Chr4 2319157 2321114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00231 4 355 Nodulin-like Gene Family AT3G18200 68.436 5.39e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00231 - - vra:106768622 620.542