Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00210 ATGAGAATGAGGTGTAATCTCTTTGAGTGCTGCTTCAGTAGCACTTCTGGCACATTTCCAAAGCAGAGTAAATGGAAAATATTGCCATACAAGAAACTTGCAAAAGTCACAGATAACTTCGGTCAATCTCATTGTCTTGGAAAAAGAGGTTTTGCCACTGAATATTATGGAAAACTTGAGGATGGACGTGAGATTACAATCCAGTGCTTCAACGAAGACAAGCACCACATATTGCAACAGTTTATCAATGAAACTACTATCCTAAATTACTTGCCTCACAAAAATATTCTGTCAATTTATGGGTGTGCTTCTCATCACGAGGAATCCATGCTAGTCCATGAATACTTATCCAACTGCAATCTTGCTGCTCATCTTAAAAGTGAAGATGAAAACAGCATACTACCTTGGCTGACACGATTAGGTGTAGCTATTGATATTGCAAATGCATTGGACTATCTTCACTGTTATGGCATTATCCACCGCAATGTGAAGTCCAGCAATATTCTTCTAGATGTGAACTTTTCTGCTAAACTTGGAAACCTTCATTTATCATGCAAACTTCCTGATGGAGTTCCTGTCTATGCTGCCCATGTTACTAATGATATAATTGGAACAAGTTGTTATATCGACCCAGATTACTTGACAAAAGGTCTGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGGGTTCTGGATGAGGAGGATAATCTTGCTACACTTTTAAGAAGAAAAACAGAAAAGCGATCTTTGGTGGAGCTGTTGGATCCAAGGCTTGGCTTCCAATCAAACCTTAAGATCAAGAGGATGATGACTGCTACAGCTGAGCTTGCACTTTTGTGCATGCAATGTTCACAAGAATTAAGGCCAAACATGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGCAAGGGAGACATGAAAGAAACACAACAAAAGCTTTGAAAATCTTTCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTGATACTTGCCTTGGAAAGGGAGGCTATGGCACCGTGTACTATGGAAAACTTAAGGATGGACGAGAGGTTGCAATAAAATGTTTCCATGACGAGAGTGAGACAGAAAAGATCATTAAGCAATTCATGAAAGAAACTGAGATCTTGGTTTTGTTGAACCATAAAAATCTGGTTTTACTTTATGGCCGCACTTCACGCCATAGCAACAAGCACATGCTAGTGTACGAGTACATCTCCAATGGCACTCTTTCTAAACATCTTCATGAACCTTCCTGTTGTAAACTACCATGGCATACTAGATTGAACATTGCTATCGAAACTGCAACTGCCTTGGTATATCTCCATGACTCAGGTATCATCCACCGAGATGTGAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATTATGTCACGCACGTTTCCACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGTCTATAGTTTTGGCGTGGTCTTGTTTGAACTTATATCTTCCAACCCCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATCTTAAACAAGGAATTAAACGCGGTAGTGGACCCGAGCTTTTGGTTTGGTGTTGACAGAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTTAGACCATCCATGAAACAGGTGCTAGGGACCCTTGAGGGCATTAGGGAAGGAACATGGGGATTCAACCAGATAACTTAG 1884 0.4013 MRMRCNLFECCFSSTSGTFPKQSKWKILPYKKLAKVTDNFGQSHCLGKRGFATEYYGKLEDGREITIQCFNEDKHHILQQFINETTILNYLPHKNILSIYGCASHHEESMLVHEYLSNCNLAAHLKSEDENSILPWLTRLGVAIDIANALDYLHCYGIIHRNVKSSNILLDVNFSAKLGNLHLSCKLPDGVPVYAAHVTNDIIGTSCYIDPDYLTKGLLSVKNDVYSFGVVLCELLSSKLAKYWVLDEEDNLATLLRRKTEKRSLVELLDPRLGFQSNLKIKRMMTATAELALLCMQCSQELRPNMEQVLEILNGIKQGRHERNTTKALKIFHHAELEEATNNFDTCLGKGGYGTVYYGKLKDGREVAIKCFHDESETEKIIKQFMKETEILVLLNHKNLVLLYGRTSRHSNKHMLVYEYISNGTLSKHLHEPSCCKLPWHTRLNIAIETATALVYLHDSGIIHRDVKGSNILLDENFTVKVADFGFSRSLPDYVTHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSNPPSLMEGTDYVTLAQFAKRKILNKELNAVVDPSFWFGVDRNMMEMITAVAELAFQCVQCPKELRPSMKQVLGTLEGIREGTWGFNQIT* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00210 627 SUPERFAMILY Protein kinase-like (PK-like) 17 313 IPR011009 -
Lapu4g00210 627 Gene3D Transferase(Phosphotransferase) domain 1 421 621 - -
Lapu4g00210 627 Pfam Protein kinase domain 347 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00210 627 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00210 627 SMART serkin_6 40 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00210 627 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00210 627 Gene3D Transferase(Phosphotransferase) domain 1 118 316 - -
Lapu4g00210 627 Gene3D Phosphorylase Kinase; domain 1 317 420 - -
Lapu4g00210 627 Gene3D Phosphorylase Kinase; domain 1 14 115 - -
Lapu4g00210 627 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
Lapu4g00210 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lapu4g00210 627 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 325 619 IPR044652 GO:0004672
Lapu4g00210 627 Pfam Protein tyrosine and serine/threonine kinase 47 311 IPR001245 GO:0004672|GO:0006468
Lapu4g00210 627 FunFam Wall-associated receptor kinase 3 421 626 - -
Lapu4g00210 627 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Lapu4g00210 627 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00210 Lapu-Chr4 2107499 2110026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00210 329 617 Receptor kinase-like Gene Family AT1G25390 52.542 1.09e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu4g00210 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00210 - - vun:114181918 1158.67