Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00189 ATGGAGGAAAATCTGCCTCCTGGATTCAGGTTCCATCCTACAGACGAAGAACTCATCACATGTTATCTTACGAAGAAGGTTTCTGATTCTAGCTTCACATCCAAAGCTATAGCTGTTGTTGATCTCAACAAATCTGAACCTTGGGACCTACCAGGTAAGGCCTCCATGGGGGAAAAAGAGTGGTACTTCTTCAGCTTAAGAGACAGAAAGTATCCAACTGGACTTCGAACAAACCGAGCCACTGAATCAGGTTACTGGAAAACCACAGGGAAAGACAAGGAAATTTTTCGTACTGGTGTTTTGGTAGGAATGAAGAAAACCCTAGTCTTCTATAGGGGTAGAGCTCCAAGGGGAGAGAAAAGTAATTGGGTCATGCACGAATATAGACTTGAAAACAAGCATCACTTAAGATCTTCAAAGGATGAATGGGTGGTTTGCAGGGTTTTCCAAAAGAGTTTACAAGTGAAGAAACCACAGCAAACACCCTCATCACAACCAGAGTCCCCATGTGACACAGTCTCAATGGTCAATGAATTTGGTGATGTTGAGCTTTCTAATCTAAATAGCATTGCAAATTCCTCAGGTGGACTCACTAACAATATTTCAGGACACACTTTTATCAATGCTGATCTCAGTAATAGTGTTAACACAAGCATGAACTTGGCCATGAATTGGCCAGTTGCAAGCGAGGTTCAGGTTCCCCCTCTTCCATCCCTACCATGGCCTTCTGGGTTGCTAAATCCAAGTATTTCTGTAAATTCTTTGCTTCTCAAGGCATTGCAACTTAGGAGTTATCAACAAAGAGAAGCAGCAGTAGCTACAGATAATTTTGCATCATATATGTCTCAAGGAGTTTGCCAAGTTGGAACTGACCTAAGTTCAAATCTGACTGCCTCTTCTTCAAAAGTTCAAGAATGTATGCCACAGCAGCAGCAACAGGAGCAACCATTCAACTTGGACTCCATTTGGTGA 972 0.4228 MEENLPPGFRFHPTDEELITCYLTKKVSDSSFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRTGVLVGMKKTLVFYRGRAPRGEKSNWVMHEYRLENKHHLRSSKDEWVVCRVFQKSLQVKKPQQTPSSQPESPCDTVSMVNEFGDVELSNLNSIANSSGGLTNNISGHTFINADLSNSVNTSMNLAMNWPVASEVQVPPLPSLPWPSGLLNPSISVNSLLLKALQLRSYQQREAAVATDNFASYMSQGVCQVGTDLSSNLTASSSKVQECMPQQQQQEQPFNLDSIW* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00189 323 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Lapu4g00189 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 257 - -
Lapu4g00189 323 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Lapu4g00189 323 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Lapu4g00189 323 FunFam NAC domain-containing protein 100-like 14 155 - -
Lapu4g00189 323 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00189 Lapu-Chr4 1887156 1889138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00189 1 323 NAC Transcription Factor Family AT3G18400 56.757 7.81e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu4g00189 NAM 2.4e-40 No_clan