Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00186 ATGAATCCACCATCAAATAACCACAATATAGAACCCAGAGACCTGGGTAATTCAAGTTTGAATATCAATGGAGTTAACTCACCCCAGAGGAAGGTCTTGTCAGAAACAAAGTTGCAACGTGTTTTACACAGTCCACTTATGACAGAGTCATCAACTACATTAATAAATCAAGTTGGTCACAAGTCTCCCGAGGTGTTTCAACTAAAACAAGGAAGTTATGCAGATCTTCCTTCAACAAAAATTTCAGAACTAATGAAGTCAATTAGTTTGGATAATGCTCCTACCCAGTCGCTTTTGAGTGTAGTGAATGGTATTTTAGAAGAAAGTGTTGAAAGAAGAAATGGCGAGATACCCCATCAAAACAATATTTTTAAGGCCCGTGAAGAAAAATATCACTCAAGAATCAGAGTCCTAGAGGCTCTTGCATCTGGAACAGATGGAGAGAGTGAGATTGTTAATATAAACCAGCTTCAACATTTAAAGACCGAGAGGATTGAAAAGGAAAAAAAGAAGTTAGAGGAATTAAAACAAACTCGGATGACTAAAAAGGAAGAAGAAAAGGAAAATGATATAAAGCTAGTTGAGAACACTAAAAGGGAAGAGAAGAGGGACTGTGACAAAGAGGTTATTAGATATATTAAAGAGTTGAAGGATAAAACTATGGAAATTTCAGCATTGAAGCAAAATTTAGAAACAATGAAAAAAACATATGAAGTACAATGTTCACAGATGGAATTAAAAGCTAAGGAGGAAAATACAGCAGATAGCAAAGAGGTTATTAGATATATTAAAGAGTTAGAGGACAAAACTATGGAAATTTCAACATTGAAGCAAAAACTAGAAACGATGAAAAAAACGTGTGAAGTGCAATGCTTACAATTAGAAGCAAAAGCTAAGGATGAGAAGATGACAAATGACAGAGATGCAATTAAAGTGCTAGAGGACAAAAATATGGAAATTTCAACGTTGAAGCAAAAACTAGAAAAACTAGAAACGGTGACAAAAACTTATGAAGTACAATGTTCACAATTGAAAGCAAAAGTTGAGCAGGAAAATATGGTAGATGGAAAAGAGGCTATTATGAAAGAATTGGAGGACAAAAATATGGAAATTTCAGCGTTAAACAAAAATCTAGAGACATTGAAAAAAACATATGAAGTACAATGCTCACAGTTGGAAGCTCAAGTTGAGGAGGAAAAGAGGGCAGATGATAAAGAGGTTAGTGGATATATTAAAGAGCTAGAGGACAAAAATATGGAAATTTCAACACTGAAGCAAAGACTAGAAACGGTGACAAAAACATATGAAGTACAATGCTCACAATTGAAAGCAAAAGCTGAGGAGGAAAAGATGGCAGATGGAAAAGAGGCTATTAGATATGCTAAAGAATTGGAGGAAAAAAATATGGAAATTTCAGCATTTAAGCAAGAACTAGAAACTATGAAAAAAACATATGAAGTTCAATACTCACAGTTGAAAGCAAAAGCTGAAGAGGAAAAAATGGCAGATGGGAATGAGACTACTAGATATATTAAAGAGCTAGAGGGAAAAGATATGGAAATTTCAGCATTTAAGCAAGAACTAGAAACTATGAAAAAAACATATGAAGTTCAATACTCACAGTTGAAAGCAAAAGCTGAAGAGGAAAAAATGGCAGATGGGAATGAGACTATTAGATATATTAAAGAGCTAGAGGGAAAAAATATGGAAATTTCAGCATTTAAGCAAGAACTGGAAACAATGAGAAAAACATATGAAGTTCAATGCTCACAGTTGAAAGCAAAAGCTGAAGAGGAAAAAATGGCCGATGAGAAAGAGGCTATTAGATATACTAAAGAGCTCGAGAGAAAAAATATGGAAATTTCAGCATTTAAGGAAGAACTAGAAGCAATGAAAAAAACTTACGAAGCACAGTGCTCACAATTGAAAGCAAAAGCTGAAGAGGATGGTAAAGAAATTATGAAATATATTAAAGAGGTAGAGAACAAAAATATGGAAATTTCATCATTTAAACAAGAACTAGAAACAACGAAAAAAACTCATGAAATACAATGCTCACAATGGGAAGCAAAAGTGGAGGATGGTAAAGAAGAACTGAAACAGAAATCACAAGAATACGAAAATTTGTTGGAAAAACTAAGAAATGAGGTTAAAGAGAATGAAACCCTTTACGAGTCAAAATATCAGAAGTGGATCAAGAAAGAGAATCAGATACGGAAAGATGTGAATTTTCAGTTTAGTTCCATACAGAAATTGAAATTATCATGGGAATCCATTAAGCAAGATGCTTTGAAAGAGCAAATGATTTATTCTGAGGAATGTAAAAAATTAGGTGTAAATCTTAAATCACTAGTAGATGCAGCTGAGAATTATCAAATAGTTCTTGCAGAAAATCGAAAACTATTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTATATTGTCGACTTAGACCGTTTCTTCCGGGTCAAAAGGAAAAACAATCTATTGTGGAACACGTTGGTGAAACTGACTTGGTTGTGGCAAATCCTTCCAAACAAGGAAAGGAAGCCCTTAGAACATTTAAGTTCAATAAGGTCTTTGGTCCAACTGCAACTCAAGCTGCGGTGTATGCTGACATACAAGCCTTTATAAGATCAGTGTTGGATGGGTTTAATGTATGTATATTTGCTTATGGCCAGACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATAATGCAACACCTGAGAATCTTGGTGTTAACTATCGAGCTCTTGATGATCTCTTCAACATATCTACAAGTAGAAAAAGCTCCATAGTGTATGAGATTGGGGTTCAAGTAATTGAGATATACAATGAACAACATGTCATGTTTCTGAACCATGATTTCCTTGATTTACACACACTTGGGATATTGAATCACTCTCAACCAAATGGATTAGCAGTACCTGATGCTACCATGCAACCTGTGAAGGCAACTGGAGATGTCATAAAGCTTATGGACATTGGTCTAAAAAATAGAGCAAAGGGTTCGACAGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCACGTTCGTGGGATGGATAAAAAGTCTGGTTCCTCTCTTCAAGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTAGATCGCTCAGAAGTAACTGGGGATAGACTCAAGGAAGCACAGCATATTAACAAATCACTATCTGCCCTTGGAGATGTCATTTTTTCACTTTCTCAGAAGAGTTCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAAACATCTCTTGGAGGTCAAGCAAAAACACTCATGTTAGTCCAAATTAATTCTGACCAAAAGTCTTTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTGGAGTTAGGAGCTGCTAGAAGTTCTAAAGATGGAAGAGATGTTAGAGATTTAATGGAACAGGTGTCTTCTCTCAAGGACACTATTTTGGTTAAAGATGAGGAGATTGAGAAGTTACAATTACTCAAAGATCTAAAAAATGTATATCCTGGTGTTAATTCAGAGAACGTTGAAACTGCCACAGAATGA 3603 0.3511 MNPPSNNHNIEPRDLGNSSLNINGVNSPQRKVLSETKLQRVLHSPLMTESSTTLINQVGHKSPEVFQLKQGSYADLPSTKISELMKSISLDNAPTQSLLSVVNGILEESVERRNGEIPHQNNIFKAREEKYHSRIRVLEALASGTDGESEIVNINQLQHLKTERIEKEKKKLEELKQTRMTKKEEEKENDIKLVENTKREEKRDCDKEVIRYIKELKDKTMEISALKQNLETMKKTYEVQCSQMELKAKEENTADSKEVIRYIKELEDKTMEISTLKQKLETMKKTCEVQCLQLEAKAKDEKMTNDRDAIKVLEDKNMEISTLKQKLEKLETVTKTYEVQCSQLKAKVEQENMVDGKEAIMKELEDKNMEISALNKNLETLKKTYEVQCSQLEAQVEEEKRADDKEVSGYIKELEDKNMEISTLKQRLETVTKTYEVQCSQLKAKAEEEKMADGKEAIRYAKELEEKNMEISAFKQELETMKKTYEVQYSQLKAKAEEEKMADGNETTRYIKELEGKDMEISAFKQELETMKKTYEVQYSQLKAKAEEEKMADGNETIRYIKELEGKNMEISAFKQELETMRKTYEVQCSQLKAKAEEEKMADEKEAIRYTKELERKNMEISAFKEELEAMKKTYEAQCSQLKAKAEEDGKEIMKYIKEVENKNMEISSFKQELETTKKTHEIQCSQWEAKVEDGKEELKQKSQEYENLLEKLRNEVKENETLYESKYQKWIKKENQIRKDVNFQFSSIQKLKLSWESIKQDALKEQMIYSEECKKLGVNLKSLVDAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHVGETDLVVANPSKQGKEALRTFKFNKVFGPTATQAAVYADIQAFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNNATPENLGVNYRALDDLFNISTSRKSSIVYEIGVQVIEIYNEQHVMFLNHDFLDLHTLGILNHSQPNGLAVPDATMQPVKATGDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGMDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDQKSFSESLSTLKFAERVSGVELGAARSSKDGRDVRDLMEQVSSLKDTILVKDEEIEKLQLLKDLKNVYPGVNSENVETATE* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00186 1200 SMART kinesin_4 809 1147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 Coils Coil 213 247 - -
Lapu4g00186 1200 PRINTS Kinesin heavy chain signature 1040 1058 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 PRINTS Kinesin heavy chain signature 1089 1110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 PRINTS Kinesin heavy chain signature 1009 1026 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 PRINTS Kinesin heavy chain signature 885 906 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 Gene3D Kinesin motor domain 753 1141 IPR036961 -
Lapu4g00186 1200 Coils Coil 411 434 - -
Lapu4g00186 1200 Coils Coil 525 552 - -
Lapu4g00186 1200 Coils Coil 263 297 - -
Lapu4g00186 1200 Coils Coil 158 204 - -
Lapu4g00186 1200 MobiDBLite consensus disorder prediction 1 31 - -
Lapu4g00186 1200 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 753 1141 - -
Lapu4g00186 1200 ProSiteProfiles Kinesin motor domain profile. 811 1139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00186 1200 PANTHER KINESIN-LIKE PROTEIN KLP-3 672 1176 IPR027640 GO:0003777|GO:0007018
Lapu4g00186 1200 Coils Coil 310 402 - -
Lapu4g00186 1200 Coils Coil 457 502 - -
Lapu4g00186 1200 Coils Coil 564 730 - -
Lapu4g00186 1200 Gene3D - 649 689 - -
Lapu4g00186 1200 Gene3D - 252 295 - -
Lapu4g00186 1200 Gene3D - 354 393 - -
Lapu4g00186 1200 Gene3D - 204 245 - -
Lapu4g00186 1200 Gene3D - 308 346 - -
Lapu4g00186 1200 Gene3D - 453 493 - -
Lapu4g00186 1200 Gene3D - 403 444 - -
Lapu4g00186 1200 Gene3D - 554 594 - -
Lapu4g00186 1200 Gene3D - 603 643 - -
Lapu4g00186 1200 Gene3D - 504 543 - -
Lapu4g00186 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 811 1177 IPR027417 -
Lapu4g00186 1200 Pfam Kinesin motor domain 817 1137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00186 Lapu-Chr4 1854199 1860942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00186 691 1139 Calmodulin-binding Proteins AT5G65930 34.513 4.25e-62 230