Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00172 ATGGTGGAGTTGGTGAAAGAAGCAGCGGAGGCGCGTGAGGTTGTGGACCTCACTGAGCGAGTGGGGGAAGTTTTGAGGGACATGGCATGCAAGATGGTGTTGGGAAGGAACAAGGATGATAGGTTTGACTTGAAAGGTATTCTTTTGGAGACCATGAGTGTTTCAGGAGCTTTCAATTTGGCAGATTATGTGCCTTGGTTAAGACCCTTTGATCTTCAGGGATTAACACAACGATCAAGGAAAATCAGTGAAGCACTTGATAAAATGTTGGAGGTGATGATTGAGGAACATCAACTAGCTCCTAAAGCACAAGGGCACCTTAATGATTTCATCGACACATTACTTTCGTTAAAAGACCAACCAATACATCCACATGCTGAAGATGCAACTATAATTGATAAAAGAAGCATCAAGGGTATTGTGTTTGACATGATAATTGGTGCATCAGAAACTTCTAGCAATGTGATTGAATGGGCCATTTCAGAAGTTGTGCGACATCCAAGAGTGATGGAAAGTCTTCAGAAGGAGCTAAAAGATGTGGTTGGAATGAAGAAGATGGTGGAAGAGATTGATTTGGCAAAACTAAGTTATTTGGATATGGTTTTGAAGGAGACCCTAAGGCTACACCCTGTTGTGCCCTTACTAGCCCCTCATGAATCAATGGAAGATATAGTGATAGAAGGTTATTACATAAAGAAGAAGTCACGAATAATAATAAATGCATGGGCCATAGGGAGAGACCCTAAAGTGTGGTCTGAAAATGCTGAAGTATTTTACCCTGAAAGATTTATGAATAGCAGTGTAGATTTGAAGGGACAAGACTTTCAACTCATACCATTTGGGTCTGGTCGTAGAAGCTGCCCAGGAATGGTAATGGGTCTGAGCATAGTTAAATTGGTTATAGCTCAACTGATACACTGCTTCAACTGGGAGCTACCTTATGGTCTTGATGAAATAGATATGAATGAGAAATCAGGGTTATCAATGCCAAGAGCAAAACATTTGCTTCTGATTCCAACTTATCGTCTACTTCATGAAACTTTAGTGAATTAA 1053 0.4055 MVELVKEAAEAREVVDLTERVGEVLRDMACKMVLGRNKDDRFDLKGILLETMSVSGAFNLADYVPWLRPFDLQGLTQRSRKISEALDKMLEVMIEEHQLAPKAQGHLNDFIDTLLSLKDQPIHPHAEDATIIDKRSIKGIVFDMIIGASETSSNVIEWAISEVVRHPRVMESLQKELKDVVGMKKMVEEIDLAKLSYLDMVLKETLRLHPVVPLLAPHESMEDIVIEGYYIKKKSRIIINAWAIGRDPKVWSENAEVFYPERFMNSSVDLKGQDFQLIPFGSGRRSCPGMVMGLSIVKLVIAQLIHCFNWELPYGLDEIDMNEKSGLSMPRAKHLLLIPTYRLLHETLVN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00172 350 Gene3D Cytochrome P450 1 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 280 289 IPR017972 GO:0005506|GO:0016705
Lapu4g00172 350 PANTHER CYTOCHROME P450 93A3-LIKE 1 343 - -
Lapu4g00172 350 PRINTS P450 superfamily signature 278 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS P450 superfamily signature 147 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 FunFam Uncharacterized protein 4 338 - -
Lapu4g00172 350 PRINTS E-class P450 group I signature 277 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS E-class P450 group I signature 287 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS E-class P450 group I signature 136 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 PRINTS E-class P450 group I signature 156 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 SUPERFAMILY Cytochrome P450 7 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00172 350 Pfam Cytochrome P450 1 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00172 Lapu-Chr4 1709750 1711172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00172 15 344 Monolignol Biosynthesis Gene Families AT4G36220 39.017 6.16e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00172 - - gmx:100798918 616.305