Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00171 ATGTTATCTCAAACATTAGCTATTCCTGCAATACTCCTTGTGGTATTCATACTTGTTGTATCAGCTGCTGTGTTAAAACCAAAACAAGGCCAAGGTAAGGGAAAACATCCACCTGGTCCTAAGAGCCTGCCAATTATTGGTCATCTCCACATGCTAGGGAAATTACCACACCGCACCCTTCAATCCCTTGCAACAAAATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTCCAACCATTGTGATATCCTCACCTGAAACAGCTGAACTATTCCTCAAGACTCATGACATTACTTTTGCTTCCAGGCCTAAAAGCATCTCATCCAAATATATTTCCTATGGTAGCAAGGGCATAGTTTTTTCTGAGTATGGTCCCTACTGGCGCAACATGAGGAAACTGTGCACAATACAACTTCTTATTGCATCGAAAGTTGAGATGTTTTCTCCTTTGAGAAGCGAGCAGTTGGAAGAGTTTGTCAGGTTTCTCCAGAAAACAGGATCATCGCGTGAGGTTATGGATCTCAGTGATACTGTAGGGGATCTCATTGAGAATATCACCTTTAAAATGATATTTGGTCGCAGTAAGGACGATAGATTCGATGTAAAGAACCTTGTTCGTGAAGTACTGAACTTGGCTGGAACTTTCAATATTGCAGATTATTTGCCTTGGCTACGCATATTTGATCTTCAGGGACTAGTAAGACGATTAAAGAAAGTGTGCAAATCATTTGACGTAGTGATGGAGCAGATTATCAAAGACCATGAACAAGATAAAGAACATAAAGGCCGAAAGGACTTTGTGGACATATTCCTTGCACTCATGCATCAACCCCTGGATCCTCAGGATGAACATGGTCCTGTCATTGAAAGAATGCATATCAAGGCTGTTGTGATGAGTATGATTATTGCAGGAATCGACACATCTGCCACAACGGTTGAGTGGGCTATGTCAGAACTCTTAAAGCATCCAAGGGTGATGAAGAAACTTCAAGATGAGTTGGAAAGTGTAGTGGGGATGAATAGAATGGTGGAGGAGACTGATATGGAAAAATTGCCTTATTTGGACTTGGTGGTGAAGGAGACACTAAGATTGTACCCTGTTGCACCTTTGCTAGTACCTCGTGAGTGTAGAGAAGATATTACTATAGATGGTTATTTCATAAAGAAAAAGTCAAGGGTCATAGTGAATGCATGGGCTATGGGGAGAGATCCTAAAGTTTGGTCAGATAATGCTGAGGTGTTTTGTCCTGAAAGATTTGGCAATAGCAATGTGGACATAAGAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTAACCACTGTTAAGATTGTTCTAGCTCAATTGGTTCATTGCTTCAATTGGGAGCTTCCATTGGGCATGTCCCCTGATGAATTGGACATGACTGAGAAATTTGGTCTCACAATGCCAAGAAGTAAGCATTTGCTAGCTGTGCCGACTTATCGCCTAGCAGGTGAAGTTTGA 1521 0.4175 MLSQTLAIPAILLVVFILVVSAAVLKPKQGQGKGKHPPGPKSLPIIGHLHMLGKLPHRTLQSLATKYGPIMSLKLGQVPTIVISSPETAELFLKTHDITFASRPKSISSKYISYGSKGIVFSEYGPYWRNMRKLCTIQLLIASKVEMFSPLRSEQLEEFVRFLQKTGSSREVMDLSDTVGDLIENITFKMIFGRSKDDRFDVKNLVREVLNLAGTFNIADYLPWLRIFDLQGLVRRLKKVCKSFDVVMEQIIKDHEQDKEHKGRKDFVDIFLALMHQPLDPQDEHGPVIERMHIKAVVMSMIIAGIDTSATTVEWAMSELLKHPRVMKKLQDELESVVGMNRMVEETDMEKLPYLDLVVKETLRLYPVAPLLVPRECREDITIDGYFIKKKSRVIVNAWAMGRDPKVWSDNAEVFCPERFGNSNVDIRGFDFRLIPFGSGRRGCPGIHLGLTTVKIVLAQLVHCFNWELPLGMSPDELDMTEKFGLTMPRSKHLLAVPTYRLAGEV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00171 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 PANTHER CYTOCHROME P450 93A3-LIKE 13 502 - -
Lapu4g00171 506 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00171 506 CDD CYP71-like 66 494 - -
Lapu4g00171 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Lapu4g00171 506 FunFam Cytochrome P450 83B1 23 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00171 Lapu-Chr4 1697381 1708072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00171 11 499 Cytochrome P450 AT3G26300 40.443 9.24e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00171 - - gmx:100798918 840.106