Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00170 ACAAAGCATAAAATGTTACTTGAAACATTGGTCATCCCTGCAACACTCCTTGTGCTATTCATTTTGGTTCTATCCTTTGCCTTGTTCCATCCAAACCACCTTCAAGATGATAGGAAACATCCACCAGGTCCTAAGGCCTTGCCAATTATTGGTAACCTTCACATCCTAGGAAAACTCCCACATCGAACACTTCAAGCTCTTTCCAAAAAGTATGGTCCCATTATGTCCATCAAGTTAGGACAAGTCCCGGCCATTGTGGCTTCCTCACCTGAAACTGCAGAACTATTCCTCAAGACCCATGACACTGTCTTTGCTAACAGGCCCAAAATTCAATCATCAGAATACCTCTCTTATGGCAGTAAGGGCATGGTGTTTTCTGAGTATGGACCCTATTGGCGCAACGTGAAAAAACTGTGCATCACACAGCTTCTAAGTGCTTCAAGGGTTGAGATGTTTGGTCCTTTGAGGAGGGAGGAGTTAAGAGTATTTGTGAAGTCACTTGAAAAGGCAGCAGCCTCTGGTGATGTTGTGAATGTGAGTGAGCAAGTTGGGGAGCTTATATCCAATATTGTCTGTAAAATGATACTTGGCCGCAGTAAAGATGATAGATTCGACCTAAAAGGCCTTACTCGTGAGGTTCTGCACTTGACTGGAGTGTTCAATGTATCAGATTATGTACCTTGGGCGGCCATCTTTGATATTCAGGGAATAAAAAGAAAATTTAAGAAAGCTAGTAAGGCATTTGACGAAGCGTTTGAACAAATTATCAAAGATCATGAATATCCTACTGATAGCGATAAGAAAAGTGTGCACTCTGAGGATTTTGTGGACATACTTTTATCACACACGCAGCAAACCGTGGATCCGCTCGAACAGAAGCAATTCATTGACAGAAATAATATCAAGGCTATCCTATTGGATATGATTGCAGGAGCATTCGAGACATCAGCTGTGGCAATTGGGTGGGCCATGTCAGAACTCTTAAGGCACCCAAGGTATATGAAGAAACTTCAAGAAGAGTTAAATAATGTAGTTGGGATGGATAGGTTTGTGGAAGAGTGTGACTTATCAAAGCTGCATTTTCTGAATATGGTAGTGAAAGAGATTTTAAGGCTGTATCCTCCTGGGCCCTTGCTGGTGCCTCGTGAGTCCTCAGAAGATATTACTATTGATGGCTATCACATAAAGAAGAAGACAAGAGTTTTGGTCAATGCATGGGCCATAGGACGAGACCCTAAAGTATGGTCAGAAAATGCTGAAATGTTTTATCCGGAGAGATTTGTTAACAGTAACATAGACATTAGAGGACATGACTTTCAACTTTTACCATTTGGTTCTGGTCGCAGAGGATGTCCTGGGATACAATTGGGTCTAACCACATTTGGTTTTGCTTTGGCTCAGTTGGTGCACTGCTTCAATTGGGAACTTCCATTTGGCATGTCTCCTTGTGACTTAGATATGACTGAAACATTTGGCCTTTCACTACCCAGAAGTAAGCATTTGCTAGCTATACCAACTTATCGTCTATCTAATAAAGCATAA 1542 0.417 TKHKMLLETLVIPATLLVLFILVLSFALFHPNHLQDDRKHPPGPKALPIIGNLHILGKLPHRTLQALSKKYGPIMSIKLGQVPAIVASSPETAELFLKTHDTVFANRPKIQSSEYLSYGSKGMVFSEYGPYWRNVKKLCITQLLSASRVEMFGPLRREELRVFVKSLEKAAASGDVVNVSEQVGELISNIVCKMILGRSKDDRFDLKGLTREVLHLTGVFNVSDYVPWAAIFDIQGIKRKFKKASKAFDEAFEQIIKDHEYPTDSDKKSVHSEDFVDILLSHTQQTVDPLEQKQFIDRNNIKAILLDMIAGAFETSAVAIGWAMSELLRHPRYMKKLQEELNNVVGMDRFVEECDLSKLHFLNMVVKEILRLYPPGPLLVPRESSEDITIDGYHIKKKTRVLVNAWAIGRDPKVWSENAEMFYPERFVNSNIDIRGHDFQLLPFGSGRRGCPGIQLGLTTFGFALAQLVHCFNWELPFGMSPCDLDMTETFGLSLPRSKHLLAIPTYRLSNKA* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00170 513 CDD CYP71-like 70 501 - -
Lapu4g00170 513 PANTHER CYTOCHROME P450 93A3-LIKE 16 510 - -
Lapu4g00170 513 Gene3D Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 FunFam Cytochrome P450 83B1 28 504 - -
Lapu4g00170 513 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Lapu4g00170 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00170 513 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00170 Lapu-Chr4 1693589 1695634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00170 38 510 Cytochrome P450 AT3G26330 41.494 1.80e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00170 - - gmx:100782181 821.617