Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00169 ATGTTGCTTCTTCATGCACTGGCTATCTCTGCAATACTCATTGTGATCACAGTCTCATTCATTCTTATTCTGTTAAAAAACAAACATCATGGGAAAACTGCACCAGGTCCCAAACCCTTGCCAATTATTGGTAACCTTCACATGCTAGGAAAACTCCCACATCGAAGTCTCCAATCCCTTGCTACAAAATATGGTCCCATAATGTCCTTCAAGCTAGGGCAGGTTCCAGCCATAGTGGTTTCTTCCCCTGAAACTGCAGAACTGTTCCTCAAAACCCGTGATACTGCTTTTGCCAGCAGACCCAGAATCCAAGCCTCAGAATCCCTTTCTCACGGCAGCAAGGGTTTGGCCTTTTCTGAGTACAGTGCATACTGGCGCAACGTGAGGAAAGTGTGCACTCTGCAGCTTCTGAGTGCCTCAAAGGTTGATATGTTTGCTCCTCTGAGGAGAGAGGAGTTGGGAGAGTTGGTGAAGTCGCTGAAACATTCTGCAGAATCTCGTGAGGTTGTGGATCTGAGTGAGTTGCTGGGGGAACTCTTGGAGAAAATCGTGTTTAGAATGGTCTTGGGACGTACCAAGGATGATAGGTTGGACTTGAAAGGGCTTGTCCAAGAGGTGATGAACTTGGTTGGAGCCTTCAATCTTGCAGATTACATGCCCTGGTTAGGGCTGTTTGATCTTCAGGGAATAACAAAACGATTAAAGAAAGCAAGCAAGTTATTTGACGAGATGTTGGAGCAAATTATCCAAGACCACGAGAGTAATCCATATGACAAGGATAACAAACGCAACATGGACTTTGTAGAGATACTGCTATCATTCATGAACCAATCCAATGATCTTCAGAACCAAGAAAACATCATTGATAGAACAAACGTCAAAGCTATCATATTAGACATTATCACTGCAGCATTTGACACCTCATCCACAACGGTAGAGTGGGCCATGTCACAACTCTTGAGGCACCCAAGTGTGATGAAGAGACTTCAACAGGAGCTAGAAAATGTGGTCGGAATGCACAGACACGTGGAGGAAAATGACTTAGAAAATTTGCCTTATTTGAGCATGGTGGTGAAGGAAACACTAAGGTTGCACCCGGTTGCACCTTTGCTAGTACCTCGTGAGTGTAGAGAAGATATTACTATCAATGGTTATTTCATAAAGAAAAAATCAAGGCTTATAGTGAATGCTTGGGCTATAGGGAGAGATCCTAAAGTTTGGGACAATGCCGAGATCTTCGATCCTACGAGGTTTGAGAATAACAACGTAGACATTCGTGGAAAGGACTTTCGGATTTTACCATTTGGGTCGGGTCGAAGAGGGTGCCCTGGGATTCATTTGGGTTTAACCACGGTTAGTCTTGTTTTGGCTCAATTGGTGCATTGTTTTGATTGGGCGCTTCCATTGGGCATGTCTCGCGATGAGTTAGACATGCACGAGGTATTTGGACTCACCACACCAAGAAAGAAGCATTTGTTAACCAGACCAGTTTATCGACTACCTGGTTAG 1509 0.4427 MLLLHALAISAILIVITVSFILILLKNKHHGKTAPGPKPLPIIGNLHMLGKLPHRSLQSLATKYGPIMSFKLGQVPAIVVSSPETAELFLKTRDTAFASRPRIQASESLSHGSKGLAFSEYSAYWRNVRKVCTLQLLSASKVDMFAPLRREELGELVKSLKHSAESREVVDLSELLGELLEKIVFRMVLGRTKDDRLDLKGLVQEVMNLVGAFNLADYMPWLGLFDLQGITKRLKKASKLFDEMLEQIIQDHESNPYDKDNKRNMDFVEILLSFMNQSNDLQNQENIIDRTNVKAIILDIITAAFDTSSTTVEWAMSQLLRHPSVMKRLQQELENVVGMHRHVEENDLENLPYLSMVVKETLRLHPVAPLLVPRECREDITINGYFIKKKSRLIVNAWAIGRDPKVWDNAEIFDPTRFENNNVDIRGKDFRILPFGSGRRGCPGIHLGLTTVSLVLAQLVHCFDWALPLGMSRDELDMHEVFGLTTPRKKHLLTRPVYRLPG* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00169 502 FunFam Cytochrome P450 83B1 21 495 - -
Lapu4g00169 502 Coils Coil 326 346 - -
Lapu4g00169 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 SUPERFAMILY Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 CDD CYP71-like 63 492 - -
Lapu4g00169 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Lapu4g00169 502 PANTHER CYTOCHROME P450 93A3-LIKE 10 500 - -
Lapu4g00169 502 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00169 502 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00169 Lapu-Chr4 1686476 1692965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00169 12 497 Cytochrome P450 AT3G26300 39.113 6.68e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00169 - - var:108345921 823.928