Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00152 ATGAGGAAGAAAACCTATTCCTTCCACTTCTCACTCTCTCTTTCTCTCTTCATCGCTCTTCTTGCTCACTCCCTCTGCGCCTCCGAGGCAATCTCCCACAATGGGCCTCTCACTGACGCTGAAGCCACCTACATCAAGCAGCGCCAGCTTCTCTACTACAAAGACGAGTTCGGCGACCGAGGAGAAAAGGTAACCGTAGATCCCTCTTTCCGCTTCGAGAACAACCGTTTGAGAAACGCTTACATAGCGTTACAAGCATGGAAGCAGGCCATTCTTTCTGATCCCAAAAACCTCACTCTCGACTGGGTGGGGCCCAATGTCTGCAACTACACCTACGTTTTCTGCACTCAAGCACTTGACAACCCTAAGATCCGCACCGTCGCCGGAATCGACCTCAACCACGGCGACATTGCCGGATACCTCCCCGAGGAGCTTGGCTTGCTCACCGACCTCGCGCTCCTCCACATCAACACCAACCGCTTCTGTGGAACCGTGCCGCACAAGTTCGACAAGCTCAAACTCCTCTTCGAGCTGGATCTCAGTAACAACCGATTTGCAGGAAAGTTCCCCGACGTGGTGCTGCGTCTCCCGCAGCTCAAGTTTCTAGATCTGAGGTTCAACGAATTCGAAGGCACGGTCCCCAAGGAGCTCTTCGACAAGGACCTCGATGCCATTTTCATCAACGACAACCGCTTCCATTTCGACCTTCCGGAGAATTTCGGCAACTCGCCGGTGTCGGTGATCGTGCTGGCCAACAACCGCTTCCACGGCTGCGTGCCGGCTGGAATCGGCAACATGAAACGCCTGAATGAGATTATTCTGATGAACAACGCGTTCAGGTCGTGCTTCCCTGAGGAGATAGGGTTGCTGAAGAACTTGACGGTTTTCGATGTGAGCTTCAACCAGTTGTTAGGGCCTTTGCCTGATTCTATCGGAGGTGCCGTGGGTTTGGAGCAGCTTAATGTAGCGCATAATTTACTCTCCGGGAAGATTCCTGAGAGCATTTGTAAGCTTCCCAATCTTCAGCTCTTTACTTTCTCTTACAACTTCTTCACCGGCGAGCCACCGCGGTGTCTCGCTTTGCCGGCGAAAGATGACCGCCGCAACTGCCTTCCGGCCAGGCCCTACCAGCGCTCCGCCGGACAATGTAAGTCCTTTTTGTCGCACCCTGTCGATTGCAAGTCTTTTAGGTGTAAGCCTTTTGTTCCTACCCTGCCGCCGCCTCCTCCTCCGTCTCCACCATTGCCGTCACCGCCACCACCGTCGCCTGTTTATGTCCCTCATTCCCCTCCCCCACCGCCTCCGGTGTACTCGCCTCCACCTCCACCCCCAGTGTACTCGCCACCGCCACCACCTCCAGTGTATTCGCCTCCACCGCCACCGCCGCCACCTCCACCACCTCCACCGGTTTATTCTCCCCCTCCACCACCACCTTCACCACCTCCGCCTTCACCACCCCCGCCTTCACCGCCACCGCCAGTCTATTCTCCACCCCCACCTTCACCACCGCCACCATCACCACCTCCCCCATCCCCGCCACCGCCAGTCTATTCGCCACCCCCTCCTCCACCTTCGCCGCCACCACCCTCGCCAGTATATTGTGTAAGGTCTCCGCCACCACCTTCACCGCCTCCGCCTTCACCCCCACCACCCCCAAGTCCTGTATTCTCCCCACCACCACCTGTGCAATACTACTATAGTCCACCACCGCCTCCACAACACTCGCCTCCACCGCCACCACCACACTCACCGCCGCCACCACACTCACCGCCGCCGCCTGTTTATCCCTATCTTTCACCGCCCCCACCTCCGCCTGTTCACTCTCCACCTCCGCCGGTTCATTCACCCCCACCACCATCTCCTCCACCTTGTATAGAGCCCCCACCACCACCTCCACCTTGTATAGAACCGCCACCGCCTCCACCATCACCACCACCTTGTGAAGAGCATTCGCCACCGCCACCATCACCACATCCTGCACCTTACTTGCCTCCGCCATCACCATCACCACCACCTCCCCCAGTTCAATACAGTTCTCCTCCACCACCATCGCCGCCACCACCAACACCTGTTTATTCTTACAATTCACCGCCGCCCCCGCCACCGTCGTCTCCTCCACCAGCCCCTGTATATGAAGGGCCTTTGCCACCTGTCATAGGAGTCTCATATGCATCTCCTCCTCCACCTCCCTTTTATTGA 2199 0.573 MRKKTYSFHFSLSLSLFIALLAHSLCASEAISHNGPLTDAEATYIKQRQLLYYKDEFGDRGEKVTVDPSFRFENNRLRNAYIALQAWKQAILSDPKNLTLDWVGPNVCNYTYVFCTQALDNPKIRTVAGIDLNHGDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDKLKLLFELDLSNNRFAGKFPDVVLRLPQLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFHFDLPENFGNSPVSVIVLANNRFHGCVPAGIGNMKRLNEIILMNNAFRSCFPEEIGLLKNLTVFDVSFNQLLGPLPDSIGGAVGLEQLNVAHNLLSGKIPESICKLPNLQLFTFSYNFFTGEPPRCLALPAKDDRRNCLPARPYQRSAGQCKSFLSHPVDCKSFRCKPFVPTLPPPPPPSPPLPSPPPPSPVYVPHSPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPVYCVRSPPPPSPPPPSPPPPPSPVFSPPPPVQYYYSPPPPPQHSPPPPPPHSPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYLPPPSPSPPPPPVQYSSPPPPSPPPPTPVYSYNSPPPPPPSSPPPAPVYEGPLPPVIGVSYASPPPPPFY* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00152 732 MobiDBLite consensus disorder prediction 448 599 - -
Lapu4g00152 732 MobiDBLite consensus disorder prediction 635 732 - -
Lapu4g00152 732 MobiDBLite consensus disorder prediction 604 623 - -
Lapu4g00152 732 SUPERFAMILY L domain-like 82 362 - -
Lapu4g00152 732 PRINTS Proline rich extensin signature 423 444 - -
Lapu4g00152 732 PRINTS Proline rich extensin signature 407 419 - -
Lapu4g00152 732 PRINTS Proline rich extensin signature 446 462 - -
Lapu4g00152 732 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 260 355 - -
Lapu4g00152 732 Gene3D Ribonuclease Inhibitor 80 368 IPR032675 -
Lapu4g00152 732 FunFam Leucine-rich repeat extensin-like protein 1 81 242 - -
Lapu4g00152 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00152 Lapu-Chr4 1514294 1517296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00152 21 438 Leucine-rich Repeat extension Gene Families AT3G24480 72.554 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00152 - - gmx:106799218 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00152 4 1514294 1517296 Lapu4g00152 4 1514294 1517296 ECH