Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00151 ATGGGTACACTTGGTAACACGGAAGTTTATAATCACAACCATGATGATAATGATGCTGATGGTTATCATCATGGGGTGAATTTCTCGGTTCAGAGAGGATTTGGGACGAAACTCAGGACGGGGTTGAAGGAAGCTTTGTTTCCTGATGATCCCTTTAGGCAGTTCAAGAACGAGGAGAAACCAAAGAGGAGGGTGCTGAAAGGGGTGCAATACTTCATCCCTATCTTTGAGTGGCTACCAACGTACACTTGGCGTCTCTTTTTCTCTGACTTGATTGCTGGCCTAACCATCTCAAGCCTTGCCATCCCTCAAGGCATTAGCTATGCCAAACTTGCAGACCTTCCTCCTCTCATTGGCCTTTATTCAAGCTTTGTCCCACCTCTAGTGTATGCTATATTTGGGAGTTCAAGGCACATGGCTGTGGGGACGATAGCAGCAGCATCATTGCTAATTGGTCAAACCATACAGACTGTGGCAGACCCAAATGAAGACCCAACCTTGTATCTTCATTTGATTTTTACTACCACCTTTGTCACTGGTATTTTCCAGACTTGTTTGGGAGTTTTCAGGCTGGGGATATTGGTGGACTTTTTCTCCCATTCTACCATCAATGGCTTCATGGGAGGGACAGCAGTAATTCTCATCCTCCAACAACTAAAGGGCGTGTTTGGCATGGTACATTTTTCACAAAAAACCAACTTGGTGGCAGTGGTAAAGAGCATCATCGTCAACAGACACGAGATTAGGTGGGAACCTACAGTTCTTGGCGTGGTCTTCCTTGCTTTCTTGCAATTTACCAGGCACTTGAGGAATAAGAATCCAAAACTCTTTTGGGTACCGGCTATAGCTCCAATGGTGACTGTAGTAGTTGCTGGCGTTTTCACCTACCTGGTCAAGGGCCAAAAACATGGAATTCAAATTGTGGGGCATCTAGATAAAGGATTAAATCCATTGTCCATCCACTATTTGAACTTTGATGGTAAATATTTATCAGCAGTTTTGCAAGCTGGTCTTATCACAGGGGTGTTGTCATTAGCAGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTCACTGATAATACACCTCATGATGGGAACAAAGAAATGATCGCTTTTGGCCTTATGAATTTATTCGGATCTTTTACTTCCTGCTACTTGACTAGCGGACCATTTTCGAAGACTGCAGTGAACTACAATGCTGGGTGTAAGACTGCAATGGCAAATGTGATACAGGCATTAGTAATGGCACTGACATTACAATTTTTGGCACCATTGTTTGGCTACACCCCTCTTGTTGCTCTCTCTGTCATTATCATATCTGCCATGCTTGGACTCATTCATTACGAAGAAGTCGTCCATCTCTTCAAAGTTGACAAGTTTGATTTTGTCATTTGCATGGCTGCCTTCCTTGGAGTTGTCTTCATAAGCATGGATGTTGGCCTCATGATTTCTGTTGGACTTGGGGTTCTCAGAGCCCTTTTATATGTGGCTAGACCAACGCCATGCAAGCTTGGAAAGTTACCTGAAATAGGTTTATACAGAGACACAGAACAATATAATGTTTCAACATTCCCAGGGGTTCTTATTGTTCAACTGGGTTCTCCCGTTTACTTTGCAAATTCTCTTTACGTTAAAGAAAGGATTATGAGGTATATTCGAAGTGAGCAAGCCTCTACTGGAGAAAATGTTGAGTATATCATACTTGATTTGTCAGGAGTAACATCCATTGACACAACTGCTATCAAAGCATTGGATGAGATGATTAAAGTGTTGACAAAGAATGGAATTAAGATTTTGTTCGTAAACCCTAGGCTGGAGGTGATGGAGAAGCTTGTAGTATCAAAGTTTGTAGACAAAATTGGGAAGGAGACGTTCTATCTAACATTGGATGATGCAGTGATGGCAAGTCAGTATTCACTTCGTTCATCAAAGGCAAATAATGGTGAAGATGGCATGCGTGCAATATGGAGCAACACATAG 1980 0.4242 MGTLGNTEVYNHNHDDNDADGYHHGVNFSVQRGFGTKLRTGLKEALFPDDPFRQFKNEEKPKRRVLKGVQYFIPIFEWLPTYTWRLFFSDLIAGLTISSLAIPQGISYAKLADLPPLIGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIGQTIQTVADPNEDPTLYLHLIFTTTFVTGIFQTCLGVFRLGILVDFFSHSTINGFMGGTAVILILQQLKGVFGMVHFSQKTNLVAVVKSIIVNRHEIRWEPTVLGVVFLAFLQFTRHLRNKNPKLFWVPAIAPMVTVVVAGVFTYLVKGQKHGIQIVGHLDKGLNPLSIHYLNFDGKYLSAVLQAGLITGVLSLAEGIAIGRSFAVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVIQALVMALTLQFLAPLFGYTPLVALSVIIISAMLGLIHYEEVVHLFKVDKFDFVICMAAFLGVVFISMDVGLMISVGLGVLRALLYVARPTPCKLGKLPEIGLYRDTEQYNVSTFPGVLIVQLGSPVYFANSLYVKERIMRYIRSEQASTGENVEYIILDLSGVTSIDTTAIKALDEMIKVLTKNGIKILFVNPRLEVMEKLVVSKFVDKIGKETFYLTLDDAVMASQYSLRSSKANNGEDGMRAIWSNT* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00151 659 Pfam STAS domain 519 632 IPR002645 -
Lapu4g00151 659 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Lapu4g00151 659 Gene3D STAS domain 499 639 IPR036513 -
Lapu4g00151 659 PANTHER SULFATE TRANSPORTER 37 639 IPR001902 GO:0016020|GO:0055085
Lapu4g00151 659 Pfam Sulfate permease family 87 468 IPR011547 GO:0016020
Lapu4g00151 659 SUPERFAMILY SpoIIaa-like 518 633 IPR036513 -
Lapu4g00151 659 ProSiteProfiles STAS domain profile. 517 636 IPR002645 -
Lapu4g00151 659 CDD STAS_SulP_like_sulfate_transporter 523 629 - -
Lapu4g00151 659 NCBIfam sulfate permease 74 632 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00151 Lapu-Chr4 1487183 1493190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00151 24 644 Inorganic Solute Cotransporters AT5G19600 60.932 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00151 K17471 - gmx:100789107 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00151 4 1487183 1493190 Lapu4g00151 4 1487183 1493190 ECH