Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00150 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCCAAGTCTTTCTCCCTCAACCGCCAGAACCCCTCGCACCGACACAAACACCCCGTACGCGCCGCCCCTTACCACCGCCCAATGCCCACGCGCTACGACCAGCCTATCGTCGATGACGACGATGACGACGAAGAAAACGAACCCGAAGATTTCAACGACGACAACGACGAAGGCGAAAACGGCTACGACGAAAACGACGTCGTCGGGTATCCCCGGATCCCGAAGAAGCGGAAGGTGGTAGTCGCGCCAGGCTCCTACGAGTTCGCGCCACGTTTCAAATTGTCGTACGGTTCGCGCGGTTCGGGTTCTTCCGGTGAAGAGTGGAGCGAGCACGAGACTTTGGTGCTGCTGGAGGTGTGGGGGGACAAGTTCCTCCAGCTCGGGCGCAACAGTTTAAGGTCCGAGGAATGGCACGAGGTTGCCGAGAAGGTTTCGGAGGAATTGAAGACAGAGAGAAGCGTGACGCAGTGTAGGAGCCTTTTGGACAAGCTGAAGAGAAAGTACAAGAAGGAGAAAACTAAAATGGATGAAATGGGGATGGGCTCTTGCAAATGGGCCTACTTCAAGAAGATGGACATGTTGATGGCGTCCTCTGCAAGGCAAGAGTATGGCCTTGCATGTGGGGTGGATTCTGGGGAATATGTGTTTATGAACACTAGGGTTTACTTGAACAGGTCCAATGGATTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGAGGAGGAGGGAGATGAGTTTGGTGGTGGCGGTGCCGCTGCTGCTGAGGATGAGGAGGATGAGACATCGTTCCGTGTGTTGGCGGATTCGATTCAGAAGTTTGGGAAGATTTATGAGAAGATTGAGAACAGCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTTAACAGGGAGTTGGAGCTGCAGAAGAAGCAGATTCTCGAGAGGGCGCAGGCTGAGATTGCGAAAATTCAGGAAGGGGATGAGGAGGATACCGACACATCCACGGAGAATCTCACTGAATGA 1059 0.5345 MDDMEDDARYPPKSFSLNRQNPSHRHKHPVRAAPYHRPMPTRYDQPIVDDDDDDEENEPEDFNDDNDEGENGYDENDVVGYPRIPKKRKVVVAPGSYEFAPRFKLSYGSRGSGSSGEEWSEHETLVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKTERSVTQCRSLLDKLKRKYKKEKTKMDEMGMGSCKWAYFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESESDDEEEGDEFGGGGAAAAEDEEDETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEGDEEDTDTSTENLTE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00150 352 Pfam Myb/SANT-like DNA-binding domain 118 204 IPR044822 -
Lapu4g00150 352 MobiDBLite consensus disorder prediction 333 352 - -
Lapu4g00150 352 MobiDBLite consensus disorder prediction 247 271 - -
Lapu4g00150 352 Coils Coil 292 334 - -
Lapu4g00150 352 MobiDBLite consensus disorder prediction 1 80 - -
Lapu4g00150 352 Gene3D - 119 181 - -
Lapu4g00150 352 MobiDBLite consensus disorder prediction 238 276 - -
Lapu4g00150 352 MobiDBLite consensus disorder prediction 47 74 - -
Lapu4g00150 352 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 108 339 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00150 Lapu-Chr4 1458192 1462137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00150 119 341 Trihelix Transcription Factor Family AT1G54060 30.943 6.61e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu4g00150 Myb_DNA-bind_4 2.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00150 - - gmx:100790166 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00150 4 1458192 1462137 Lapu4g00150 4 1458192 1462137 ECH