Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00144 ATGGCAACTCTCAACAATGCCTCCAACCACTCTGAATCCCTTGTCCAGATTCCAACAATAAAGTTTACCAAGCTTTTCATCAATGGAGAATTCGTAGATTCTATTTCAGGAAAAACATTTGAGACTGTTGATCCAAGAACAGAGGAAGTGATTGTTGAAATAGCAGAAGCTACCAAAGAAGATGTTGATATTGCTGTGAAGGCCGCACGTGAAGCATTTGATCATGGCCTATGGCCACGCATGCCCGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGGCACAACTAATTGAACAAAACGTAGAAGAAATAGCAGCATTGGACACCGTTGATGGAGGAAAGTTATTCAGTTGGTGTAAGGATGTGGATGTTCCTCAAGCCTCCAACATCCTACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAAATGTGTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTTGGCGTTGTTGGGCACATTATCCCTTGGAATTTCCCTACAATCATGTTCTTCGCAAAGGTTGCCCCAGCCTTGGCTGCTGGTTGCACAATGGTCATCAAGCCTGCTGAGCAAACACCTCTCTCATCACTCTTCTATGCTCATCTTGCTAAGTTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGGGCTGCAATAAGCTCACATATGAGCATTGATGCGGTTAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCGGCCTTGAGCAATTTGAAACCTGTTTCACTTGAATTAGGAGGAAAGTCGCCAATTTTGATTTTTGATGATGCTGATGTGGACAAAGCTGTTGATCTTGCTCTCTTTGGAATCCTACACAACAAGGGGGAAATCTGTGTTGCATTCTCTAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAAAAGGTAGCGGAGAAGGCTAAAACTTGGTTAGTAGGAGACCCTTTTGATCCAAAAGTTCAACAAGGACCCCAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTAAGCATGGAAAGAGTGAAGGAGCCACACTGTTGACTGGAGGTAAACCAGTGGGCAACAAAGGATACTACATTGAGCCAACCATTTTTACCAATGTTAAGGAGGACATGCTAATTGCACAAGAGGAAATATTTGGACCTGTGATGACACTTTCTAAATTCAAGACCATTGAGGATGCAATTAAGAAAGCCAACAACTCCAAATATGGCCTAGCAGCAGGGATTGTTACCAAGAACTTAGACACTGCCAACACTGTATCAAGGTCCATCCGTGCAGGCATCATTTGGATCAATTGCTTCTTTGCATTTGATATTGATTGCCCTTTCGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTTTGGACTGGAAGCACTGCATAAGTATCTTCAAGTGAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1512 0.4226 MATLNNASNHSESLVQIPTIKFTKLFINGEFVDSISGKTFETVDPRTEEVIVEIAEATKEDVDIAVKAAREAFDHGLWPRMPGAERAKIMLKWAQLIEQNVEEIAALDTVDGGKLFSWCKDVDVPQASNILRYYAGAADKIHGNVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTIMFFAKVAPALAAGCTMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGSTAGAAISSHMSIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPILIFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVAEKAKTWLVGDPFDPKVQQGPQTSKAQFDKILSYIKHGKSEGATLLTGGKPVGNKGYYIEPTIFTNVKEDMLIAQEEIFGPVMTLSKFKTIEDAIKKANNSKYGLAAGIVTKNLDTANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDFGLEALHKYLQVKSVATPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00144 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Lapu4g00144 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Lapu4g00144 503 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 27 291 - -
Lapu4g00144 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Lapu4g00144 503 FunFam Aldehyde dehydrogenase3 273 462 - -
Lapu4g00144 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Lapu4g00144 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 494 - -
Lapu4g00144 503 SUPERFAMILY ALDH-like 16 499 IPR016161 GO:0016491
Lapu4g00144 503 FunFam Aldehyde dehydrogenase, putative 465 491 - -
Lapu4g00144 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00144 Lapu-Chr4 1394999 1398646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00144 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 68.663 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00144 K12355 - gmx:100784449 932.169