Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00136 ATGAGTGTGGCTGGGAGAGCCATGCCACGATCCAATTCCGCCGCGCACCACCACCGTCAGAGCTCCGATAACTTCATCCTCGACGCTCACAGAAGCTGGTTACAGTCTTCGACTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTGAGGAAAATCGACGATGATCGTGTTTTGAGCAGTGGCTTGCTTGATCTGCATTCCTTTGATACCGAGCTTCTACCTGAGATGTATGGTGATCACAATGAATACTTCACCAATCACACTGGTCGGGGACAGACTTTTGATGACTATGAGTCAATCCTCTCTGGTAATAAACACGTACAAAGGTCTCGGGGAATGCCTGAGAACAATGTCCTTAAAAGTGTCCCAACAGAAAAAGAGAGAGCAAACAATGTTGCCAAGATCAAAGTCGCGGTCCGTAAGAGACCCCTTAATAAGAAGGAAATAGCAAAGAGAGAGGAAGACATTATTTCCATAGATTCAAATTTTCTCACTGTGCATGAAAGAAAACTCAAGGTGGACTTGACAGAATATGTTGAGAAACATGAATTTGCTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTATATGCTGAGACTGTGGAGCCAATTGTTCCGCTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGCAGTGGGAAAACATATACTATGCAACCGTTGCCTCTCAAAGCTTCCCAAGATATTTTAAGATTAATGCACCACACCTACTGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTCGAAATATATGGGGGAAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTATCTAAAGTAGAGACAATCAAGGAATTTATTGAGAAAGGAAATGCCACAAGAAGTACTGGAACAACAGGAGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGCATTAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGACTTGTGGGCAAACTATCTTTTATAGATCTGGCTGGAAGTGAACGAGGTGCAGATACTACAGATAATGACAAGCAGACTAGGATTGAAGGGGCAGAAATAAATAAAAGCTTACTTGCTCTAAAAGAATGCATTAGAGCACTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACGGAAGTTCTGCGAGATTCTTTTGTTGGTAATTCGCGCACTGTAATGATATCATGCATTTCACCTAGCTCAGGTTCGTGTGAGCATACTCTTAACACCTTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAAGGGAACAACTCTAGAAGGGACCCTCTTTCTTCCTCAAACCTTAGAGAGTCCACTGTGTTGCCTGGGTCTTCAATTTTAGCTCATGATGATACCTTGGAGGATGAAATAACGTATGTTTCCAGTGATAGGAATCGATTTGGATGGCCCAAATATCCAGAAAGAGAACCCTCTCCTCCAAATAATGTGGATCATGTTCCAAGTGGTAGAATGGGGGGAAATTTGGCGCAATCTGTATATTCTGATCCACCAAACGGTCAAAGAGGTAGTCAAAATGACAGAACTGCAAATGAATATGATTACCTAGGACCCACATATGAACAAGACAGAACAAGAAAAGCAATTAAGAGGGTGGATAACAACCAGTTATCTGCTGTGGAGGTCAAGAAGAAGATAGAATCTCGTGTTAATGTGGATGCATCACATTTTCAGACTAATCATTCTGATCCGGATGATAATTTAAACGCCCTTCTGAAGGAAGAGGAAGATTTAGTAACAGCTCATCGGAGACAGGTGGAGGAAACCATAGACATTGTTAGGGAGGAAATGAATTTACTTGTTGAAGCGGACCAACCAGGAAATCAATTGGACGATTATATTACCAAATTGAATACCATTTTATCACAAAAGGCTACGGGAATCTTTCAATTGCAGACACAGTTGGCTCAGTTTCAGAGACGTTTAAATGAGTATAATGTTTTCGTATCTCCTGGTAATTGA 2097 0.4163 MSVAGRAMPRSNSAAHHHRQSSDNFILDAHRSWLQSSTFAQEFGTRSSSLRKIDDDRVLSSGLLDLHSFDTELLPEMYGDHNEYFTNHTGRGQTFDDYESILSGNKHVQRSRGMPENNVLKSVPTEKERANNVAKIKVAVRKRPLNKKEIAKREEDIISIDSNFLTVHERKLKVDLTEYVEKHEFAFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSRRDPLSSSNLRESTVLPGSSILAHDDTLEDEITYVSSDRNRFGWPKYPEREPSPPNNVDHVPSGRMGGNLAQSVYSDPPNGQRGSQNDRTANEYDYLGPTYEQDRTRKAIKRVDNNQLSAVEVKKKIESRVNVDASHFQTNHSDPDDNLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYITKLNTILSQKATGIFQLQTQLAQFQRRLNEYNVFVSPGN* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00136 698 Coils Coil 628 648 - -
Lapu4g00136 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 458 IPR027417 -
Lapu4g00136 698 Gene3D Kinesin motor domain 114 461 IPR036961 -
Lapu4g00136 698 ProSiteProfiles Kinesin motor domain profile. 135 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 MobiDBLite consensus disorder prediction 533 557 - -
Lapu4g00136 698 MobiDBLite consensus disorder prediction 503 558 - -
Lapu4g00136 698 Pfam Kinesin motor domain 141 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 SMART kinesin_4 133 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu4g00136 698 PANTHER KINESIN-RELATED PROTEIN 6 44 692 IPR027640 GO:0003777|GO:0007018
Lapu4g00136 698 MobiDBLite consensus disorder prediction 1 21 - -
Lapu4g00136 698 MobiDBLite consensus disorder prediction 457 476 - -
Lapu4g00136 698 FunFam Kinesin-like protein 116 461 - -
Lapu4g00136 698 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00136 698 MobiDBLite consensus disorder prediction 462 476 - -
Lapu4g00136 698 CDD KISc_KIF2_like 135 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00136 Lapu-Chr4 1345020 1351575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00136 134 458 Calmodulin-binding Proteins AT5G65930 34.627 3.59e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00136 K10393 - gmx:100783382 1229.93