Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00128 ATGGCCACCATTGCCCACAAATGGAGCACCTTTTCTCTCTCTCTCTTCATTCTCTCCATCGCTCTCTTCCAAACCCTAACCCCCAATTCTTCTCCGCCCCCTCCCAATTACATCGTTGCCTTCCGCCACTACGCCGCCGCCGATCACCACCGCACCTATCTCGAATCCATCCTCCGTCCCGTGGGATGGCGCTGGATCCCGCGGCAGAACCCGGCGGCGCAGTTCCCCACTGATTTCGGGCTGGTTGCGATCGAGGACTCCGGGATGGTCGATGAGATTCGGAAACTGGGGTCGGTTAAATACGTGAGCTTGGACGTGAGCTACAAGAGGGGTTTGATGACGAAGGATCAGAGACGCAACAAGAAGGTTGGGACGTTCGAGGATGGGACGAAGAAGCGCCCCGGGAAGATCTTCACTGCGATGTCGTTTTGCGAGGCTGGAGAAGAAGATGAAAAAAATGTTGGCAATCGTAGCAGTTCCGTCAAGTGGGGGCGGGAATTGTTGATGCAGAGATCACAAGTTACTTCAATGTTTGGGGCTGAGGATCTTTGGGCGAAAGGGTACACTGGTGCCAAGGTCAAGATGGCTATATTTGATACCGGCATTCGGGCTGATCACCCTCATTTTCGTAACATCAAGGAACGTACTAATTGGACCAATGAAGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCGGGTGTGATTGCTGGTGTGGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGAGTGTTCACTGATGCACAGAACGGTTGGCAAGATTTTGAGAAGATTGCATTCAGCCTGTTGCAGGTATCATATACATCATGGTTCCTCGACGCCTTCAACTATGCAATTGCAAACAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTATTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCGCTTTATGGAACTCTGAACAATCCAGCAGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCATCCTTTTCCTCACGTGGCATGAGTACCTGGGAGCTTCCTCATGGTTATGGCCGCGTGAAGCCAGATATAGTTGCATATGGACGGGACATTATGGGATCAAAAATTAGTGCAGGTTGTAAAAGTTTATCAGGAACTAGTGTTGCGAGTCCTGTAGTTGCTGGTGTTGTATGCTTGCTTGTCAGTGTCATTCCTGAATCTGAGAGAAAAAGTATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGCAAAGCTTTCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTATTACAGTCATATGAGATTCTTAAGAGCTACAAACCCAGGTCAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCCTTTTGCCGTCAGCCACTCTATGCAGGTGCCATTCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATTGGATATGTTGAAAGTCCACCAACATGGCATCCTTTTGATGAAGAAGGGAATCTTCTAAGCATACATTTTACTTATTCTGAGATCATTTGGCCTTGGACTGGTTATTTGGCTCTTCACATGCAAATCAAGGAAGAAGGTGCTCAGTTTTCTGGTAAGATTGAAGGTAATGTGACTCTCAAGGTTTCTAGCCCCCCAGCTCAAGGAGAGAAGGGCCCTCGAGTTAGCATCTGTGTGCTTCAATTAAAGTTAAATGTGGTGCCAACACCACCACGCTCAAAACGAATTTTGTGGGATCAGTTTCACAGTATTAAGTACCCACCTGGATATATTCCTAGAGATTCCTTGGATGTTCGGAATGACATTCTTGACTGGCATGGGGATCATCTGCATACAAATTTTCACATCATGTTCAACATGTTACGTGATGCTGGTTACTATATTGAAACACTTGGTTCTCCTCTTACATGCTTCAATGCTCGGCATTATGGAACACTTCTGTTGGTGGATCTTGAGGAAGAGTACTTTGCTGAGGAGATTGAAAAACTGAGAGATGATGTTGTAAATACTGGATTAGGATTAGCTGTCTTTGCCGAGTGGTATAATGTAGATTCCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACCCCAGTTACTGGAGGTGCTAATGTTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGGTGGTTATGTTCATAGCTTTCCATTCTTAGATAGTTCAGAAAGTGGAGCCACACAGAGTGTGCTGCTAACTTCTGGCTCAACTAAGGCAGATTCTCCTATTCTTGGTCTCATGGCAATGGGTGAAGGTCGTATAGCTGTATATGGGGACTCCAATTGTTTGGACAGCAGTCATATGGTTACGAATTGTTTTTCCCTTCTGAGGAAAATACTAGAATTTACGAGTGAAGATGTTAGAGATCCCACACTTTTCTCTGATTCAAATAAACAAGACTCTCCCTTGTATGAAGCTGACAATCAGTTGCCATCCCGCAGAACTGATGTAAATTTCTCTGATTATTCAGCTATTGTGGGTAAGGAATTGATCTGCAGGACTGACTCGAGGTTTGAAATCTGGGGAACTAAGGGCTACAGCTTGCAAGTCAGAGGAAGAAACAGAAGACTGCCCGGTTTTCCTGCCATTGATTTGGGGAGGGGCTTCAATTCATCCTCTGACACTTCTAACATTAGGCGGACTAGGTTGACTATAAGAAACAAGGATGCTTCTCTGGGGAACAGGTACTTAGGCCTGTTCTATGGAGATGAGCCTGATGCACCTATACTGGTTGTTGGTCATTGGCTGATTCCTGTTGTTGTTGCAGTAACTGGTGTTTTGCTATTGAGTTTTTGGCGCATTCGCCAAAAGAGGCGTAGACGAAGGAAAGGGTCAAGTTCTGGTAGATTGGCCAATATATAG 3123 0.4502 MATIAHKWSTFSLSLFILSIALFQTLTPNSSPPPPNYIVAFRHYAAADHHRTYLESILRPVGWRWIPRQNPAAQFPTDFGLVAIEDSGMVDEIRKLGSVKYVSLDVSYKRGLMTKDQRRNKKVGTFEDGTKKRPGKIFTAMSFCEAGEEDEKNVGNRSSSVKWGRELLMQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQNGWQDFEKIAFSLLQVSYTSWFLDAFNYAIANNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPESERKSILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLQSYEILKSYKPRSSIFPSVLDYTDCPYTWPFCRQPLYAGAIPVIFNATILNGMGVIGYVESPPTWHPFDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGKIEGNVTLKVSSPPAQGEKGPRVSICVLQLKLNVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFNARHYGTLLLVDLEEEYFAEEIEKLRDDVVNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANVPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTNIVRFPRGGYVHSFPFLDSSESGATQSVLLTSGSTKADSPILGLMAMGEGRIAVYGDSNCLDSSHMVTNCFSLLRKILEFTSEDVRDPTLFSDSNKQDSPLYEADNQLPSRRTDVNFSDYSAIVGKELICRTDSRFEIWGTKGYSLQVRGRNRRLPGFPAIDLGRGFNSSSDTSNIRRTRLTIRNKDASLGNRYLGLFYGDEPDAPILVVGHWLIPVVVAVTGVLLLSFWRIRQKRRRRRKGSSSGRLANI* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00128 1040 PANTHER PEPTIDASE S8 30 459 - -
Lapu4g00128 1040 ProSitePatterns Serine proteases, subtilase family, histidine active site. 230 240 IPR022398 -
Lapu4g00128 1040 ProSitePatterns Serine proteases, subtilase family, serine active site. 409 419 IPR023828 -
Lapu4g00128 1040 FunFam subtilisin-like protease SBT6.1 162 471 - -
Lapu4g00128 1040 PRINTS Subtilisin serine protease family (S8) signature 408 424 IPR015500 -
Lapu4g00128 1040 PRINTS Subtilisin serine protease family (S8) signature 190 209 IPR015500 -
Lapu4g00128 1040 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lapu4g00128 1040 CDD Peptidases_S8_SKI-1_like 184 455 IPR034185 -
Lapu4g00128 1040 ProSiteProfiles Serine proteases, subtilase domain profile. 162 475 - -
Lapu4g00128 1040 SUPERFAMILY Subtilisin-like 174 477 IPR036852 GO:0004252|GO:0006508
Lapu4g00128 1040 Gene3D Peptidase S8/S53 domain 166 483 IPR036852 GO:0004252|GO:0006508
Lapu4g00128 1040 Pfam Subtilase family 191 456 IPR000209 GO:0006508|GO:0008236
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00128 276 1038 Subtilisin-like Serine Gene Family AT5G19660 78.831 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00128 K08653 - gmx:100819188 1882.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00128 4 1210536 1216471 Lapu4g00128 4 1210536 1216471 ECH