Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00126 ATGGGGGAAGGTGAAGGAGGAGATTGCGCTCCGAAGAATGCGTTGTCGTCGGAAGTTGTTGCGCCTACGGTAACGTCTACGACGGCGCTGGATGTTCCGGCGAAGAAGCTGGCGCGGCAGCTCGATTTCACAGGCGCGCCGGAGCATATCCAGCAGCATCCGGTGGCGGTGTTGCCGTTGCCGCCGCAGGTGCCTCATGCGAGGGTTGGGAAACCAGAATCTCCAAAATCTAGATCAAGACCTAACTTTGAAATGAAAGAGGCTACACCCAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAACGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACCTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCTAGTAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTTTAATCTTAGGAAAACATAACAAGGGCTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTTCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGTAAGAATTTTGAGGGAAGTGAAGAAAGACAGGCTTTGTTTCATGGAGATCAACATAACATGGCATATATTCAGCAAGCGGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATTCATCACCTCCGGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTCTTTTGGCCTACAACCAAGGATCCAGCCACTAGCAAGTTGGGACAACAGGTAAACCATGTCAGAGGTCCAGCGCCTTCCTCATCTTTGTCACCTGTCTCAGGGGCTCGTGTTGGAACTGCAACGTTAGGTCCTTCAAAATTTATGTACAGGTCTCTCTTAGCAGACATTATTCAACCACAGCACCTCAAGGAGCTATGCTCAGTTCTGGTGCTAGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATTTTAATGGAAAAGCATGCAGAAGATCAGACAGAAACTTCCCTTGCCTCGTCAAGTCAAGAGCAATTACCACCAAGTCAAAAGGAAGGTCATTTTGAGAAGACTGTGGCTGATGATTGTTCGAGTGCAAATCAAACAGATAAAATCAGCCCAGATGATTCCAGTTCAGATGGTGCCGATGTCCCAAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCCGCCTCCCCCATTGGGCCAATGGCTCATGCGTGCAATACATCTTCACAATTTCCTTATGGACAAGGAATGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTATTAACAAAGTTTAGGGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCGTTGGCCAGAAATGAATTAGAGAATCAAAAGGACCCAATCATCAATGGCATTGGAAATGCCAGCTCGGTGATACTGCCTCAGCAGGGAGCCAGTAGCAATGGTACTACTAAACCTGTTGTTTCACCTTTGGCAACAACTTCGACATGTATGATCCCAGGTAATATTTCTGAAAATGGAGAATCTAAGGTCAAGATTGAAAAAGATATATGA 1692 0.4474 MGEGEGGDCAPKNALSSEVVAPTVTSTTALDVPAKKLARQLDFTGAPEHIQQHPVAVLPLPPQVPHARVGKPESPKSRSRPNFEMKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQHNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFWPTTKDPATSKLGQQVNHVRGPAPSSSLSPVSGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKILMEKHAEDQTETSLASSSQEQLPPSQKEGHFEKTVADDCSSANQTDKISPDDSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPIGPMAHACNTSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARNELENQKDPIINGIGNASSVILPQQGASSNGTTKPVVSPLATTSTCMIPGNISENGESKVKIEKDI* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00126 563 SMART CXC_2 91 131 IPR033467 -
Lapu4g00126 563 SMART CXC_2 176 217 IPR033467 -
Lapu4g00126 563 ProSiteProfiles CRC domain profile. 92 216 IPR005172 -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 71 86 - -
Lapu4g00126 563 PANTHER TESMIN/TSO1-RELATED 65 487 IPR028307 -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 277 300 - -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 60 86 - -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 357 422 - -
Lapu4g00126 563 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 93 128 IPR005172 -
Lapu4g00126 563 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 179 213 IPR005172 -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 388 402 - -
Lapu4g00126 563 MobiDBLite consensus disorder prediction 362 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00126 Lapu-Chr4 1191149 1200108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00126 1 510 CPP Transcription Factor Family AT4G29000 54.939 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lapu4g00126 TCR 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00126 - - gmx:100818116 991.49