Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00122 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGGAAATACAGGACCAGTTCTCAGAAAATGAAGGACAAGACAAAATCTAGGAGGCCGGCTGAGACATCATTGGCTAACAAACAAGACAAAGAGGAGAAGGTTTCAAAAGGATCTGCAGAAAGGTCTGTTGATCCATCATCCTTGCAGCTCATGGAGGTATCTAGGGGGGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTAGGTATGATGGAAGCTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTACTAATGCTTCGCAAGGTGCAAGAAGCTTCACAACACATGGCTAGCTTGAAGAGAAGACAAAATGGGAAACCTGAAAGAGGCAGATTTGATGCAATGCCGATTGATGGAACTACACATTGTGACCATTTTGGTGAACAAAGCTATCCAATGGGATCCCAAAGACGTTGGCCTTCAGCTGATGGTTCTTCAAGTAGTTGCACTGAGGAGCTTAAAAAGGTGATTAAGGAGAGCCTGGTTAGCCAAAATTTGTTCACAACCACTGAAGGGTTGGATTCAGCATCCACATTCCACTCTACAAACTCAAGCCAATCTTCTGGGGCTTGGAATGATAAGCTTTCTGATTCTTCTTTCTCACCAACAACTTCGAGGAGGGAAAGACGATCCAATCTGGTTGCCAAGCTGATGGGTTTAGAAGAAGCCCCTTCAAGATCATTTCCAGCTGTTACACAAAAACAGCTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACATATATTCGACATAGATATGCCTAAGGTAAGAAAAAATATTGAGAAGGTTAATCTAGAACGTAAGATGACCTTGAAGGAAATTCTTGAAACGACTCATTTCAATGGACTTTTGAAGAAGAGTCCTGTCAGAGAGCCTAATGTTCAGGTCTATCATTCCATTGATCCACATTACAAACATTTTGGTGATTTACCTCCTATTGTACTCATGAAACCTCGATGTACTCCATATCAGGAATGTGTGAACAGTTATGAGCATGTTGTTCCTCCAGAAAAATTATCCCTTAGAAATCTTAAAGCAAAAGTCGTCGCTTCCAAAGTGTTCCAACACAAGGAAGGCTCAACCACCAACATGGGGAAAAAAATGGAAGAACATGTATCCAAAAGGCTCGTCAAAGAGGAAAGAACTAAGCTCCTCACAGAGGTTGTGGAGTTGAAGGAAAAAGAAATCAAGCCTATTGAAAATGAGAAGGCTCCAGGAGGTAAGGTAAAAACGCCTAGTCATGTCAATCACAAATCACATGTAAATGAAACTGTTGATAGAAAAGCTAAGGTAAAGACCACTGCCACTAGTAGAAAGCTATCAGAAAAGGAGGTTCCAAAATCAAAACATCAACAACAAAATCTTATCCCAGTTGGTGAGGTTTCGAAACCCAAAGTTGTGACAAAATCCCAAGAAGATCAAGGAGAAGTCAGCTCTACAAGTACCAAGATTAGGAAGCCACAAAGTGGGTCCAGAATTGAAAAGAATGAGATTCCCTGCAGAAAGAGCACTGTTTCAAATTCAAACACCATCTCAAAACCAAAGAGTCAAAAAATTAGTTATTCCAAGGAACAGAAAAAGAAACAGATGAAGAAGCAAAGGCCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGATGAACAGTTAGCCCAAGAAGAAGCAAAGAGTGTTGGTGTTTCCAATAGAGATGATTGCCCTGAGATTAGAATAATAGCTACAATAACAGATGATCTTGTGATGGAGCATGAAGAAATATATGCATCTGCAAATAAGATTAGAGAAATTTGTGAGCAAAACCAGAGTTCTTCAAGTGGTGATTATTTGATGCTCAAGTCTGAACATGAAAATGATGCCCTTCCTGCTGAGCAAGCTCATGACAACATCAATATCAGTGAAACCGATTGCAAGCCTGACAAAGAGAGTCCCGAGCTTAAATATTTGCTTCTAACAAGTCAATCATTTATTGAACATGCAGAGGAGCTCCTCAATCTCGACGTTGACTGTCCCAAGCTCCTGCTGAAAAGTGAAACTAAGGAAATAGCCAATCTCAGACTCTATTTGGACTGTGCAAATGAAGTCACTGAGCGTAAAAGCCTTCAGGGATCACAAGCAGTTCACCCTTTATTGCTAACTTGTGCGGGGAATCCAAGATTGCACATTTCTTTAGTGAGGTTGGTTGATGAAGTCTGTAGTGCCATTGAGCATCTAACATCTTACAGTGAAAAACTAGCTTCGGATAATATATATGCAATGATGGAGAGAGATATAAAGGGAAACAACGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCCGCAGATGAAGCTGAACAAGTTGTCAGTGAAGTAGAGAACCTAGTTTTAGGTGGATTGATTGAGGAGGTAATTGTAAATTTATGA 2511 0.4074 MYRPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKSRRPAETSLANKQDKEEKVSKGSAERSVDPSSLQLMEVSRGAQRLNNMIDSWSRGLRYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHMASLKRRQNGKPERGRFDAMPIDGTTHCDHFGEQSYPMGSQRRWPSADGSSSSCTEELKKVIKESLVSQNLFTTTEGLDSASTFHSTNSSQSSGAWNDKLSDSSFSPTTSRRERRSNLVAKLMGLEEAPSRSFPAVTQKQLESPKILNQKRHIFDIDMPKVRKNIEKVNLERKMTLKEILETTHFNGLLKKSPVREPNVQVYHSIDPHYKHFGDLPPIVLMKPRCTPYQECVNSYEHVVPPEKLSLRNLKAKVVASKVFQHKEGSTTNMGKKMEEHVSKRLVKEERTKLLTEVVELKEKEIKPIENEKAPGGKVKTPSHVNHKSHVNETVDRKAKVKTTATSRKLSEKEVPKSKHQQQNLIPVGEVSKPKVVTKSQEDQGEVSSTSTKIRKPQSGSRIEKNEIPCRKSTVSNSNTISKPKSQKISYSKEQKKKQMKKQRPAVAEPEAAKPVDEQLAQEEAKSVGVSNRDDCPEIRIIATITDDLVMEHEEIYASANKIREICEQNQSSSSGDYLMLKSEHENDALPAEQAHDNINISETDCKPDKESPELKYLLLTSQSFIEHAEELLNLDVDCPKLLLKSETKEIANLRLYLDCANEVTERKSLQGSQAVHPLLLTCAGNPRLHISLVRLVDEVCSAIEHLTSYSEKLASDNIYAMMERDIKGNNGLINGIWNWGWRHGFSADEAEQVVSEVENLVLGGLIEEVIVNL* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00122 836 MobiDBLite consensus disorder prediction 25 67 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 207 241 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 448 481 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 207 240 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 431 593 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 25 59 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 551 570 - -
Lapu4g00122 836 Coils Coil 406 426 - -
Lapu4g00122 836 PANTHER OS01G0228800 PROTEIN-RELATED 1 835 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 503 519 - -
Lapu4g00122 836 MobiDBLite consensus disorder prediction 532 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00122 Lapu-Chr4 1159881 1164813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00122 670 833 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.143 2.48e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00122 - - gmx:100797863 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00122 4 1159881 1164813 Lapu4g00122 4 1159881 1164813 ECH