Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00098 ATGGCTTCTTCAATTCGTCCCTCCCTCTCTTCCTTCATGTTACCCTCCTTCTCTTCTTACAACCCTTCTCAAAAGCTCTGTCTTTTTCATGTTCGTAGCGCTATTAGACGGATTCATAATTTTGGCCTGGAAGCTTCTAAGTTTTTGAGGCACGATGATGATGATAACAGCATGAGACCGAAGGCATCTGGGAACACGTCCCCAGTTGCTACACAGAAAAATGCACTTGATTGGGTCAAACGTGACAATAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTAGACAAGACCATAAAATTTTACGGCGAGTGCCTCGGAATGAAGTTGCTCAGAAAGCGTGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGAATGGACACTTTTCTATTGAACTGACATACAATTATGGAATTGACAAATACGACATTGGAGATGGATTTGGTCATTTTGGTCTCGCTGTTAATGATATTTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGCAAAATTACTAGAGAGCCTACCCTTGTCAAGGGAGTCAACTCTGCAATTGCATATATTGAAGATCCTGATGGTTATCAATTTGAACTTCTGGAAAGAGCTCGCTCTACCGAGCCTTTGTGCAAAGTAATGCTTCGAGTTGGTGATCTTGACCGTTCCATTAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGATCACAAGATGATCCAGAATCCAAGAACACAATAGCAATACTGGGTTATGGTCCAGAGGGAAAAAATGCTGTCCTGGAGTTGACTTACAACTATGGAGTCACAAAATATGATAAAGGAGATGCATATGCTCAGATTGCAATTGCTACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCGGGAACCTGGACCAATACCTGATGCAAAGATGAAGATCACATCATGCGAGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGCTGACTTTATTAGGGAGTTGGAGTAG 1044 0.4167 MASSIRPSLSSFMLPSFSSYNPSQKLCLFHVRSAIRRIHNFGLEASKFLRHDDDDNSMRPKASGNTSPVATQKNALDWVKRDNRRMLHVVYRVGDLDKTIKFYGECLGMKLLRKRDMQEQRHTNAFLGYGPENGHFSIELTYNYGIDKYDIGDGFGHFGLAVNDISRIVELVRAKGGKITREPTLVKGVNSAIAYIEDPDGYQFELLERARSTEPLCKVMLRVGDLDRSIKFYEKAFGMELLRSQDDPESKNTIAILGYGPEGKNAVLELTYNYGVTKYDKGDAYAQIAIATDDVYKTAEAIKLAGGKITREPGPIPDAKMKITSCEDPDGWKTVFVDNADFIRELE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00098 347 Gene3D - 58 211 IPR029068 -
Lapu4g00098 347 Gene3D - 212 347 IPR029068 -
Lapu4g00098 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 215 339 IPR037523 -
Lapu4g00098 347 NCBIfam lactoylglutathione lyase 85 210 IPR004361 GO:0004462|GO:0046872
Lapu4g00098 347 ProSitePatterns Glyoxalase I signature 1. 88 109 IPR018146 GO:0004462|GO:0046872
Lapu4g00098 347 FunFam Lactoylglutathione lyase 212 347 - -
Lapu4g00098 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 339 IPR029068 -
Lapu4g00098 347 PANTHER LACTOYLGLUTATHIONE LYASE 63 347 - -
Lapu4g00098 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 86 206 IPR004360 -
Lapu4g00098 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 333 IPR004360 -
Lapu4g00098 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Lapu4g00098 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 85 209 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00098 Lapu-Chr4 908736 911930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00098 218 336 Calmodulin-binding Proteins AT1G08110 30.137 2.55e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00098 4 908736 911930 Lapu4g00098 4 908736 911930 ECH
Lapu3g03783 3 61265699 61270809 Lapu4g00098 4 908736 911930 PCT