Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00072 ATGGGTCGGCGAAAGAGCAACGATAATCAGTGTTCCTCAAGCAAGGAAAACACCACCATGAATAACCACCTTCGCTTTCAGGATGCTGAAGAGGCTGTCGAAGAGAGTTCCAACCTCGACCAATCCATGTGTGACATCGATGAATCCGATGATAAAACTAGTGCTGACTACTATTTTGATTCCTACTCTCATTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTAAGAACTAAGACATATCAAAATGTTATTTACCAGAATAAGTTTCTGTTCAAGAATAAAGTAGTTCTAGATGTTGGAGCTGGGACTGGGATTTTGTCACTATTTTGTGCCAAAGCAGGGGCAGAACATGTCTATGCGGTTGAGTGCTCTCATATGGCTGACATGGCAAAGGAGATTGTTGAAACTAATGGTTTCTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAGCTTCCTGTTGCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTATGCACGTGACAAATGGCTTGCGGATGATGGAGTTGTGCTACCAGATAAAGCTTCCCTCCATCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTAACATGAGTTGCATCAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAACCAGATTGCTACAAATTGCCAATTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTTACAGCACCTTTTAAACTTGTAGCTGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTGATGTATCGTTTACGAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAAATCACGAACCACACATTGGAAACAAACAGTTCTATATCTGGAAGATATCTTGACCATATGTGAGGGGGAGGCAATTGTAGGGAGCATGACTGTTGCACCAAACAAAAAGAATCCCCGGGATGTTGATATAATGCTCAAGTATTCGTTGAATGGAAAGCGATGCAACGTTTCAAGGGTTCAATACTACAAGATGCGTTAA 1131 0.397 MGRRKSNDNQCSSSKENTTMNNHLRFQDAEEAVEESSNLDQSMCDIDESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGFSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFNMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPKSRTTHWKQTVLYLEDILTICEGEAIVGSMTVAPNKKNPRDVDIMLKYSLNGKRCNVSRVQYYKMR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00072 376 Gene3D Vaccinia Virus protein VP39 46 198 IPR029063 -
Lapu4g00072 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 356 IPR025799 GO:0016274|GO:0018216
Lapu4g00072 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 363 IPR025799 GO:0016274|GO:0018216
Lapu4g00072 376 FunFam probable protein arginine N-methyltransferase 1 46 198 - -
Lapu4g00072 376 CDD AdoMet_MTases 97 197 - -
Lapu4g00072 376 MobiDBLite consensus disorder prediction 1 45 - -
Lapu4g00072 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 167 - -
Lapu4g00072 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 375 IPR029063 -
Lapu4g00072 376 Gene3D - 200 376 - -
Lapu4g00072 376 MobiDBLite consensus disorder prediction 1 25 - -
Lapu4g00072 376 FunFam Blast:Protein arginine N-methyltransferase 1 200 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00072 Lapu-Chr4 710274 713417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00072 6 339 C2H2 Transcription Factor Family AT3G12270 36.464 2.61e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00072 K11434 - gmx:100781777 721.465