Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00068 ATGGAAAAATTCAGAGAAATGGAAAAGATCAAGGATCCATCAATTTACCGCAATCCAGTCATATTGCAGAGCGAGGACTTAACCAAGTATATACTGGAAACAGCTGTTTACCCTAGAGAACCTGAGCCCCTGAAAGAGCTGAGGGAAGTCACTAATAATCACCCTTGGGGCTTCATTGCTACTTTACCTGATGCGGGTCAGCTAATGACCTTACTTTTAAAGTTGTTGAATCCCAAAAAGACCATTGAAGTGGGAGTCTTTACTGGTTACTCCCTTCTCCTCACCGCACTCAACATTCCTCATGATGGAAAGATTACCGCCATAGATATTGACAGGAGAGCTTATGACATTGGATTACCAGTCATAAAAAAGGCTGGAGTTGAGCACAAGATTGACTTCATAGAGTCCCCAGCTCTACCAATTTTGGATAAACTACTTGAAGATCCTGCAAATGAAGGATCTTTTGACTTTGCTTTCATTGATGCTGACAAAGAGAACTATCTTAACTACCATGAGAGGCTTATAAAACTGATAAAGATTGGTGGTTTACTTGTATATGACAACACTCTGTGGGGTGGACGTGTTTCCTGGCCCGAAGAAAAAGTTCCACCACACACTAGATCAGGGAGGAATGCTGCAATTGAATTCAACAAAACAATCACAAAAGATTCTCGTGTTGAATTTTCTCTTACTTCTGTGGGAGATGGTCTCAATATTTGTAGGCGCGTTGCTTGA 735 0.4122 MEKFREMEKIKDPSIYRNPVILQSEDLTKYILETAVYPREPEPLKELREVTNNHPWGFIATLPDAGQLMTLLLKLLNPKKTIEVGVFTGYSLLLTALNIPHDGKITAIDIDRRAYDIGLPVIKKAGVEHKIDFIESPALPILDKLLEDPANEGSFDFAFIDADKENYLNYHERLIKLIKIGGLLVYDNTLWGGRVSWPEEKVPPHTRSGRNAAIEFNKTITKDSRVEFSLTSVGDGLNICRRVA* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00068 244 Gene3D Vaccinia Virus protein VP39 13 244 IPR029063 -
Lapu4g00068 244 PANTHER O-METHYLTRANSFERASE-RELATED 18 243 - -
Lapu4g00068 244 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 20 243 IPR002935 GO:0008171
Lapu4g00068 244 CDD AdoMet_MTases 82 186 - -
Lapu4g00068 244 Pfam O-methyltransferase 34 243 IPR002935 GO:0008171
Lapu4g00068 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 242 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00068 Lapu-Chr4 678179 680663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00068 21 243 Monolignol Biosynthesis Gene Families AT4G26220 64.574 7.30e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00068 K00588 - gmx:100800911 430.639