Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00062 ATGGAAATAGTCAGTTTGGCAGAATCAGACGTGACACATGTTTGCCTTGTGAACAAGGGAGCAGGAACTCCCTTTATCTCAGGATTAGAGATTAGACCACTTAATAGTTCTATTTATAAGACTGAGTTTGGGGAATCTGCATCACTAACACTTTTCAAACGATGGGACATGGGGTCACTCAATGGAAGTGGTAGATACGAGGATGATATTTATGATAGGATTTGGTCCCCTTTCAATTCTTCATCCTTGGATTCTGTCAGCACTTCCACACCAATAAACATCAATGGTGATGGCTTTAGACCACCATTTGAAGTTATTAGGACTGCTGCTAGGTCAAGGAATGGCAGTGATACTTTGGAGCTTTCCTGGACCCCAGATGATCCAAATTGGAAATTTTACGTCTACTTGTACTTTGCTGAAGTGGAGCAGCTTGAGAAAACCCAACTGAGGAAATTCAATATATCTTGGAATGGATCTCCATTGTTTGATTCCATAGTACCACGCCACTTGTTTGCAACCACTCTTTTTAATTCAAAATCCCTGGTGGCAAATGAACATCGTATTTCCATACACAAAACAAAAGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGATTTATGTAGTGAGACAGCTAGATGCACTTGCAACATTTGAACAAGATGTTGATGCTATGCTGGATATAAAGGACAGCTACAGAATTCAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACCACTCTTGGGAAGGCTTAAAATGCAACTATAGCACTTCTCTTCCTCCCCGAATTATATCTCTGAATATGAGCTCCAGCAGTTTGAGTGGAACATTAATTTCAGCCATTTCCAATCTCTCCTCGTTGGAATCTTTGGACTTACACAACAATAGCTTAACGGGAGCAATGCCTCAGTTCTTGGAAGAATTGAAATCCCTTAAATATTTGGATTTGAAGGAAAATCTATTTTCGGGTTCAGTTCCGGTCACTCTTTTAGAAAGATCAAGGGCTGGGTTACTTACATTGAGGGTGGATGATCAAAATCTTGGTGAGTCAGGAGGGAACAATAAAACCGTTAAAATTGTTGTCCCCATTGTGGTATCAGTATCAGTTTTAGTTATAGTGGTCGCTTTCATTCTCTTTTGGAAACTTAGAAGAAATGAACGATCAGATGAGGAGATCAGTATGCTCAACAAAAGTGGAAAAACTGTAACAACGAAGAACTGGCAATACACGTATTCGGAAGTCGTGGACATCACCAACAACTTTGAAACGGTCATTGGTAAGGGAGGATTTGGAACTGTGTACAGTGGGCAGATGAAAGATGGCAAAGCAGTTGCAGTCAAGATGCTTTCTCCATCGTCATCTCAGGGGCCAAAAGAATTTCAAACTGAGGCTGAGCTTTTGATGACAGTTCATCACAAAAATTTGGTATCCTTCGTTGGTTATTGTGATGATAATAGCAAGATGGCTCTCATATACGAGCACATGGCGAATGGCAGCCTGAAAGATTTTCTCTTGCTCTCAGATGGAAATTCACATTGCTTGAGTTGGGAAAGGAGAATACAGATAGCAATCGATGCCGCTGAGGGGTTGGATTACCTACACCATGGTTGCAAGCCACCAATAATACACAGGGATGTAAAGTCAGCAAACATTCTTTTAAGTCAAGACTTAGAAGCTAAGATAGCAGATTTTGGCCTCTCCAGGGAATTTAGGAAAGATAACCAGAAGCAACAGTCTCAAGTGATTCATAATGATGCCACAAATGATAAATCTGCAGTAATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAAATTAGGGAGCCTGAATGAGAAAAGTGACATCTATAGCTTTGGAATTGTTCTACTTGAATTAATCACAGGTCGTCCTGCAATATTCAAAGGCAACAGAATAATGCACATACTTGAATGGATAAGACCTGAGCTTGGAAGAGGAGAATTGAGTAAAATTATAGATCCAAGGCTTGAAGGAAAATTTGGCGCAAACTGTGGGTGGAGAGCTTTAGGAATAGCAATGGCATGCTCTGCATCAACCTCCATTCAGAGACCTACAATGAGTGTTGTGATAGCAGAGTTAAAACAGTGTTTGACAATGGAATCTCCCAGTGACACTGAAACATTTGTGCCCCCACCAAAACAAGTCTACACCGAATTCTACAGTTCATCTGAAGCATATTCTTATGATAGTGAATCTATCACCTACCCTTTCCCAAGATAG 2250 0.4076 MEIVSLAESDVTHVCLVNKGAGTPFISGLEIRPLNSSIYKTEFGESASLTLFKRWDMGSLNGSGRYEDDIYDRIWSPFNSSSLDSVSTSTPININGDGFRPPFEVIRTAARSRNGSDTLELSWTPDDPNWKFYVYLYFAEVEQLEKTQLRKFNISWNGSPLFDSIVPRHLFATTLFNSKSLVANEHRISIHKTKDSTLPPILNAVEIYVVRQLDALATFEQDVDAMLDIKDSYRIQRNWVGDPCEPKNHSWEGLKCNYSTSLPPRIISLNMSSSSLSGTLISAISNLSSLESLDLHNNSLTGAMPQFLEELKSLKYLDLKENLFSGSVPVTLLERSRAGLLTLRVDDQNLGESGGNNKTVKIVVPIVVSVSVLVIVVAFILFWKLRRNERSDEEISMLNKSGKTVTTKNWQYTYSEVVDITNNFETVIGKGGFGTVYSGQMKDGKAVAVKMLSPSSSQGPKEFQTEAELLMTVHHKNLVSFVGYCDDNSKMALIYEHMANGSLKDFLLLSDGNSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDLEAKIADFGLSREFRKDNQKQQSQVIHNDATNDKSAVMGTTGYLDPEYYKLGSLNEKSDIYSFGIVLLELITGRPAIFKGNRIMHILEWIRPELGRGELSKIIDPRLEGKFGANCGWRALGIAMACSASTSIQRPTMSVVIAELKQCLTMESPSDTETFVPPPKQVYTEFYSSSEAYSYDSESITYPFPR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00062 749 Gene3D Phosphorylase Kinase; domain 1 395 497 - -
Lapu4g00062 749 FunFam Leucine-rich repeat receptor-like kinase 221 353 - -
Lapu4g00062 749 Pfam Protein tyrosine and serine/threonine kinase 424 701 IPR001245 GO:0004672|GO:0006468
Lapu4g00062 749 PANTHER OS07G0107800 PROTEIN-RELATED 2 710 - -
Lapu4g00062 749 SUPERFAMILY Protein kinase-like (PK-like) 407 740 IPR011009 -
Lapu4g00062 749 ProSiteProfiles Protein kinase domain profile. 422 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00062 749 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 498 717 - -
Lapu4g00062 749 FunFam Leucine-rich repeat receptor-like protein kinase 400 497 - -
Lapu4g00062 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Lapu4g00062 749 ProSitePatterns Protein kinases ATP-binding region signature. 428 450 IPR017441 GO:0005524
Lapu4g00062 749 CDD STKc_IRAK 428 705 - -
Lapu4g00062 749 SUPERFAMILY L domain-like 248 334 - -
Lapu4g00062 749 Gene3D Transferase(Phosphotransferase) domain 1 498 719 - -
Lapu4g00062 749 Pfam Leucine rich repeat 268 323 IPR001611 GO:0005515
Lapu4g00062 749 Gene3D Ribonuclease Inhibitor 213 338 IPR032675 -
Lapu4g00062 749 Pfam Malectin-like domain 2 209 IPR024788 -
Lapu4g00062 749 SMART serkin_6 422 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00062 Lapu-Chr4 651895 657058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00062 2 710 Receptor kinase-like Gene Family AT4G29180 50.276 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu4g00062 PK_Tyr_Ser-Thr 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00062 - - gmx:100779617 1314.29