Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00037 ATGGAACCATTCACCCCATCATCATTGTATCTTAAATTGCTGTTTCACTCTCTTGTGATCTTACTCCTGGTTGTTACTCATGCAAACTCTCAGTCTCAATCTCAGTTGCAAGCTCAAGAACATGCAATCTTACTGAAGATAAAGCAGTACCTTGAAAACCCTTCATTCCTCAGTCACTGGACCTCATCAAACTTCTCCCACTGCTCTTGGCCAGAGATAACGTGCACCGATGATTCTGTCACTGGATTGACTCTTTCCAACAATAGCATCCATCAAACTATACCCTCTTTTATATGTGACCTCAAAAACCTCACACATGTTGATTTCTACAACAATTTTATTCCTGGGGAGTTCCCAACGTATCTCGTCAATTGCTCCAAGTTGGAGTTCCTAGACCTGTCGATGAACGACTTTGTTGGTAGCATCCCTCGTGACATTGGTAAGTTGCATGATAACTGGACGCGGTTGAACAAGTTGAAATTCTTTTTTATGTTTGAGTCCAACTTGGTCGGGGAGATTCCTGAAACCATTGGAAACATGGTGGCTTTGAAGAGATTGGATCTATCAATAAATGATTTAAGTGGTCAAATTCCCCACGATTTGTTCATGCTGAAGAGTCTGAACATAATTTTTCTTTCTAGAAACAATCTATCTGGAACAATACCTGATGAGGTTGAAGCATTGAATTTGACCATCATTGACCTGACACAGAATTCTATCTCAGGAAAAATACCAGATGGTTTTGGAAAGCTTCAAAATTTAACGGGTTTGGCTTTGTCTGTAAATAAATTGCAAGGAGAGGTACCACAAAGCATAGGCCTTCTCCCATCTCTGGTAGATTTTAAAGTATTTAGCAACAATTTATCAGGTACTCTTCCTCCCGACTTTGGCCGCCACTCAATGCTTAGAACCTTTCTGATTTCAAATAATAATTTTAGTGGAAAGCTACCGGAGAACTTATGCTATAATGTTCACTTGCAAAACATATCTGCCTATGAAAATCATCTTAGCGGGGAGTTGCCGCAATCACTTCGTAATTGTAGTAGCCTGATAGATCTGAAAATTTATAGTAATGAGTTTTCTGGTAGCATTCCTAGTGCTCTTTGGAATTTCAATTTGTCAAATTTCATGGTGAGCCACAATAAGTTCACTGGCGAGCTTCCTGAGATATTGTCCTCAAGTATTTCGCGATTGGAGATAGATTACAATCAGTTTTATGGTAGGATTCCAAAAGGGGTGTCTTCATGGACTAATGTGGTTGTGTTTAAGGCCAGTAAGAACTACCTCAATGAGAGTATTCCAAAAGAGTTAACAGCTCTTCCCAAGCTAATAGATCTATTGCTTGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTTAGGAATCTAAATTTGCGACAAAATCAACTATCTGGACATATTCCTGATTCAATTGGTCATTTATCTCTAAACCAACTTGACCTATCAGAAAATCAGTTCTCTGGTCAAATTCCTTCTATTTCTACCAGACTCACCAATCTCAATCTATCCTCCAATTATTTGACAGGGAGGGTTCCAAGTCAATTTGAAAATTCTGCTTTTGACACCAGCTTTTTGAACAATTCTGGCCTCTGTTCTGATACCCCAGCACTGAATCTCAAGCTGAGTTTCACTGAATCAAACATAGTGTCATCACTCACAGAAAATAATATTATTGGCAGTGGTGGATATGGTGCAGTATACCGTGTTGCAGTTGACAGTTTAGGCTATGTTGCTGTCAAGAAGATCTGGGAAAACAAAAAGCTAGACAAGAAGCTTGAGAGCTCATTTCACACCGAAGTTAAAATATTGAGCAGCATTCGTCACAGAAACATTGTGAAGTTGATGTGTTGTATCTCTAAAGAGGACTCTATGCTCCTTGTCTACGAGTACGTGGAAAACCGCAGCCTTGACAGGTGGTTGCACAGGAAGAACAAGTCATCATCGGCTGTTTCAGGTTCAGTCTATCATGATGTCCTTGATTGGCCAAAGAGATTGCATATAGCAATTGGAACTGCACAAGGTTTGAGCTACATGCATCATGATTGTTCACCACCTATAGTTCATCGAGATGTGAAAACAAGCAACATTCTTTTGGATGCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCAGGATGTTGATGAATCCAGGGGAACTTGCCACCATGTCAGCTGTGATTGGATCATTTGGCTACATGGCTCCAGAGTATATTCAAACAACTCGAGTCAGTGAAAAGATCGATGTCTTCAGCTTTGGGGTAATCCTATTGGAACTTACAACTGGTAAAGAAGCTAATTATGGTGACGAGCACTCATCTCTTGCAGAGTGGGCGTGGCGCCGCCACCTACAATTAGGAAGCAACATAGAAGAGCTGCTAGACAAAGAAGTGATGGAATCCAGTTACTCGGATGGAATGTCAAAAGGTTCTCAGTCTTTGCTGTATGATCAAGAGCATGCAGTTCTATTGAAGATAAAACGATACCTGCAAAATCCACCATTCCTCCATCACTGGATCCCATCAAACTCTTCACACTGCACTTGGCCAGAGATCACATGCACCAATGGTTCAGTCACTTCACTGACTTTGTACAACACCAACATCACTCAAACACTGCCACCTTTCCTATGTGACCTAAAAAACCTCACACACGTAGATTTTCAGTTGAATTACATTCCTGGGAAGTTCCCAACATCTCTCTACAACTGCTCCAAGCTTGAGTACCTTGACCTCTCACAGAACGTCTTTGTTGGTAAGATCCCTGATGACATTTACCAGTTGGCCAGCCTGCGTTTTCTTAGCCTTGGTGGCAACAACTTCTCTGGTGATATTCCAGCTAGCATTGGGAGGCTGAAGGAGCTAAGAACCCTTCAACTTCATCAGTGTCTTTTCAATGGTACTTTCCCGGCGGAAATTGGGAACTTGTCCAACCTTGAGTCGTTGCATGTGTTCTCAAACCACATGTTCCCTCCTACAAAGTTTCCGTCAAGCTTGACCCAGTTGAACAAATTGAAGGTCTTTTATATGCATCAATCCAACTTGGTAGGGGAAATCCCCGAAACCATTGGACACATGGTGGCATTGGAGGAATTGGATTTATCAAAAAATGGTTTAAGTGGACAGATTCCCAACGGTTTGTTCATGCTGAAAAATCTGAGCATACTGTATATTTACCGGAACAGCCTCTCTGGGGATATACCTGAAGTGGTTGAAGCATTCAACTTGACAGAACTTGATCTTTCATACAATAATCTTAGTGGAAAAATACCTGATGATTTGGGAAAGCTCAGCAAGTTAACATTCTTGAGTTTGTCTACGAACCAATTATCAGGGAAGTTACCAGAAAGCATTGGTCGTCTGCCAGCTCTGACTGATTTTCTTGTTTTTCTCAACAACTTATCAGGTACCCTTCCACCAGATTTCGGTCGGATCTCAAAGCTTGAAACGTTTCAGGTTTCATCTAATAGTTTCACAGGAAGGTTGCCAGAGAACTTGTGCTACTACGGAAGGTTAGTTGGTTTAATTGCTTACCACAACAAACTGAGTGGGGAGTTGCCAGAATCTTTAGGAAGTTGCAGTAGCCTACAATATCTGCGGGTTGAAAACAATGAGCTTTCTGGCAACATTCCTAGTGGGCTATGGACATCTTTGAATTTATCACAGATTACGATAAATGAAAACAAGTTCACTGAACACAATATTATTGGCAGTGGTGGTTATGGTGCAGTATATCGTGTCGGTGTTGATGATTCAAACTATGTTGCAGTGAAAAAGATACGCAGTAGCAGAAAGTTAGAGGAGAAGCTTGTAAGTTCATTTCTTGCAGAAGTTGAAATACTGAGTAATATTCGTCATAACAACATTGTGAAGTTGCTATGCTGCATCTCCAAAGAGGATTCTCTTCTCCTTGTCTATGAGTATCATGCAAACCATAGCCTTGATAGATGGCTGCACAACAAAAGTAAGCAGACAGCTCCAGGTTCAGTCCTTGATTGGCCGAAGAGATTACATATAGCCATTGGAGCAGCACAAGGTTTGTGCTATATGCATCATGACTGCTTACCACCTGTTGTTCATCGCGATGTGAAAACAAGTAACATTCTCTTGGATTCTCAATTCAATGCGAAAGTTGCTGATTTCGGTCTGGCCATGATGTTGATGAAGCCAGAAGAACTTGCTACCATGTCAGCTGTGGCCGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTCAATGAGAAGATAGATGTCTATAGCTTTGGAGTTGTCCTATTGGAACTGACAACTGGAAAAGAAGCTAATCATGGAGATGAATACTCATCTCTAGCCGAATGGGCGTGGCGCCACATTCAGGTAGGGACAGATATAGAAGATATATTGGATAAAGAAATTAAGGAAGCTTGTTACATGGATGAAATCTGCAACATCTTCAAACTTGGGGTCATGTGCACTGCAACACTGCCAGCTAGTAGACCTTCCATGAAGGAAGTCCTGAAAATTTTGCTCACCTGCAGCAATCCACTCACCAATGGAGAGAAGAATGTCAGTTTATATGATTCTGTTCCACTTCTTAAGAATTCAAAATGGGAAACTCAGGTGGAATATTATACAGATGAGGATTGA 4680 0.4113 MEPFTPSSLYLKLLFHSLVILLLVVTHANSQSQSQLQAQEHAILLKIKQYLENPSFLSHWTSSNFSHCSWPEITCTDDSVTGLTLSNNSIHQTIPSFICDLKNLTHVDFYNNFIPGEFPTYLVNCSKLEFLDLSMNDFVGSIPRDIGKLHDNWTRLNKLKFFFMFESNLVGEIPETIGNMVALKRLDLSINDLSGQIPHDLFMLKSLNIIFLSRNNLSGTIPDEVEALNLTIIDLTQNSISGKIPDGFGKLQNLTGLALSVNKLQGEVPQSIGLLPSLVDFKVFSNNLSGTLPPDFGRHSMLRTFLISNNNFSGKLPENLCYNVHLQNISAYENHLSGELPQSLRNCSSLIDLKIYSNEFSGSIPSALWNFNLSNFMVSHNKFTGELPEILSSSISRLEIDYNQFYGRIPKGVSSWTNVVVFKASKNYLNESIPKELTALPKLIDLLLDQNQLTGPLPSDIISWKSLRNLNLRQNQLSGHIPDSIGHLSLNQLDLSENQFSGQIPSISTRLTNLNLSSNYLTGRVPSQFENSAFDTSFLNNSGLCSDTPALNLKLSFTESNIVSSLTENNIIGSGGYGAVYRVAVDSLGYVAVKKIWENKKLDKKLESSFHTEVKILSSIRHRNIVKLMCCISKEDSMLLVYEYVENRSLDRWLHRKNKSSSAVSGSVYHDVLDWPKRLHIAIGTAQGLSYMHHDCSPPIVHRDVKTSNILLDAQFNAKVADFGLARMLMNPGELATMSAVIGSFGYMAPEYIQTTRVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRRHLQLGSNIEELLDKEVMESSYSDGMSKGSQSLLYDQEHAVLLKIKRYLQNPPFLHHWIPSNSSHCTWPEITCTNGSVTSLTLYNTNITQTLPPFLCDLKNLTHVDFQLNYIPGKFPTSLYNCSKLEYLDLSQNVFVGKIPDDIYQLASLRFLSLGGNNFSGDIPASIGRLKELRTLQLHQCLFNGTFPAEIGNLSNLESLHVFSNHMFPPTKFPSSLTQLNKLKVFYMHQSNLVGEIPETIGHMVALEELDLSKNGLSGQIPNGLFMLKNLSILYIYRNSLSGDIPEVVEAFNLTELDLSYNNLSGKIPDDLGKLSKLTFLSLSTNQLSGKLPESIGRLPALTDFLVFLNNLSGTLPPDFGRISKLETFQVSSNSFTGRLPENLCYYGRLVGLIAYHNKLSGELPESLGSCSSLQYLRVENNELSGNIPSGLWTSLNLSQITINENKFTEHNIIGSGGYGAVYRVGVDDSNYVAVKKIRSSRKLEEKLVSSFLAEVEILSNIRHNNIVKLLCCISKEDSLLLVYEYHANHSLDRWLHNKSKQTAPGSVLDWPKRLHIAIGAAQGLCYMHHDCLPPVVHRDVKTSNILLDSQFNAKVADFGLAMMLMKPEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWAWRHIQVGTDIEDILDKEIKEACYMDEICNIFKLGVMCTATLPASRPSMKEVLKILLTCSNPLTNGEKNVSLYDSVPLLKNSKWETQVEYYTDED* 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00037 1559 FunFam Receptor-like protein kinase HSL1 isoform A 830 981 - -
Lapu4g00037 1559 SUPERFAMILY Protein kinase-like (PK-like) 555 799 IPR011009 -
Lapu4g00037 1559 Pfam Leucine Rich Repeat 1089 1111 IPR001611 GO:0005515
Lapu4g00037 1559 SUPERFAMILY L domain-like 395 532 - -
Lapu4g00037 1559 ProSiteProfiles Leucine-rich repeat profile. 1089 1112 IPR001611 GO:0005515
Lapu4g00037 1559 Pfam Leucine rich repeat 896 955 IPR001611 GO:0005515
Lapu4g00037 1559 Gene3D Phosphorylase Kinase; domain 1 1252 1323 - -
Lapu4g00037 1559 SUPERFAMILY L domain-like 1089 1247 - -
Lapu4g00037 1559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Lapu4g00037 1559 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 986 1084 - -
Lapu4g00037 1559 SUPERFAMILY L domain-like 831 1085 - -
Lapu4g00037 1559 FunFam Kinase family with leucine-rich repeat domain-containing protein 1323 1536 - -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 323 554 IPR032675 -
Lapu4g00037 1559 Gene3D Transferase(Phosphotransferase) domain 1 1324 1537 - -
Lapu4g00037 1559 Gene3D Transferase(Phosphotransferase) domain 1 645 832 - -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 229 322 IPR032675 -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 149 228 IPR032675 -
Lapu4g00037 1559 ProSiteProfiles Protein kinase domain profile. 1244 1528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 FunFam Receptor-like protein kinase HSL1 isoform A 234 556 - -
Lapu4g00037 1559 SUPERFAMILY Protein kinase-like (PK-like) 1225 1521 IPR011009 -
Lapu4g00037 1559 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 812 - -
Lapu4g00037 1559 SMART LRR_typ_2 440 464 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 942 966 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 1111 1135 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 990 1016 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 465 488 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 275 299 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 1040 1064 IPR003591 -
Lapu4g00037 1559 SMART LRR_typ_2 180 204 IPR003591 -
Lapu4g00037 1559 SMART serkin_6 566 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 SMART serkin_6 1244 1521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 87 148 IPR032675 -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 1008 1251 IPR032675 -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 28 86 IPR032675 -
Lapu4g00037 1559 SUPERFAMILY L domain-like 54 389 - -
Lapu4g00037 1559 ProSiteProfiles Protein kinase domain profile. 566 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 645 840 - -
Lapu4g00037 1559 ProSitePatterns Protein kinases ATP-binding region signature. 1250 1273 IPR017441 GO:0005524
Lapu4g00037 1559 Pfam Protein kinase domain 1244 1518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 Pfam Protein kinase domain 568 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00037 1559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1372 1384 IPR008271 GO:0004672|GO:0006468
Lapu4g00037 1559 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Lapu4g00037 1559 Pfam Leucine rich repeat N-terminal domain 832 868 IPR013210 -
Lapu4g00037 1559 ProSitePatterns Protein kinases ATP-binding region signature. 572 595 IPR017441 GO:0005524
Lapu4g00037 1559 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 1085 1180 - -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 942 1007 IPR032675 -
Lapu4g00037 1559 FunFam Kinase family with leucine-rich repeat domain-containing protein 551 644 - -
Lapu4g00037 1559 Gene3D Phosphorylase Kinase; domain 1 555 644 - -
Lapu4g00037 1559 Gene3D Ribonuclease Inhibitor 833 941 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00037 Lapu-Chr4 425996 441049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00037 37 822 Receptor kinase-like Gene Family AT5G25930 41.062 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu4g00037 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00037 - K00924 gmx:100798963 1103.2