Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00016 ATGAACAACTTCGCCACCTTCACTCCAAAACGGCATCCTTCTTGTAGTTTTTCCCCACGCAGCTTCAGATTCTTGCTTCATTTTCTAGCCTTCCATGTCCACCCCTTCTTTCTTCAACTGTGTTATTTCGGGATACTTTCTCTGCTTGGTTACCTTGGTCTCAAGCTCTCAACCCCACGAACCCCCGTTAGACCAAAGGACTTGGACCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCCAGCATGGTGGCCCTTGAAATGGAGCTCTTCTCCAACTCTCAACTCATTCTCGTCACCTTTCTCATGTTTGTTGGCGGGGAGGTTTTCACTTCCGTGCTTGACCTACTATTGGCCAGGTATAAATTCTCCCAGAGTGTCAAAAACAGAGTTAGCACCCATCCTTTGTCACCCACTGTTCATGCCAACCATGTTGAGCTTCGTTCAATTTCTGTTCCTCACTCAGAATCTGAAAACCACAAACCTAGTGATATTAACGTTCCAAAGGGCACGACAGTTCCCTTCGAGGACAGTGATAGACTTAAGTACAACTGTTTTACTTATCTCACTTTTGTAGTTTTAGGTTACCTTGTGGTGGTTCAATTTGTGGGGTTCAGTTTGGTGTCTTTGTACATGACCACGGTACCAAGTGCCAAACAAGTACTGAAAAGCAAAAACATTAAGATCGCAACATTTTCGTTGTTTACCATAGTTTCCACTTTTGCTAGTTGTGGTTTTGTCCCCACGAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGGCTTCTCCTCCTCATCCTCCCACACATCCTTCTAGGTAACACCCTTTACCCGCCGTGTTTGAGGCTTGTGATAATGGGTCTAAGGAAGGTTAGCAGAAGAGAGGAATTGCGGCACCTGCTGAAGAATTTCAAAGACATCGGCTATGATCATATGCTGTCTGCTCTTCATTGTTGGCTCCTGGTTGCCACTGTTTTGTGTTTGAATGTTATACAGTTTGTGATGTTTTGGTTGTTGGAGTGGAACAGCGAAAGTATGGAGGGTTTGAGTGTTTATGAGAAAGTGGTGGGGTCGTTCTTCCAAGTTACAAATGCCAGACACGCTGGTGAATCTGTCTTCGATCTCTCTTCCTTCTCTTCGGCCATGTTGGTGCTCTTCGTTGTCATGATGTACCTTCCACCATACACTACATTTCTACCCGTGAGAGAGGAGGAGAAGGATGTGCAGAGAAAGGGAAGAAGCCCATTGGAGTGCCTTGTGTTATCTCAACTCTCTTACTTGGCCATTTTCATTATTCTCATCTGCATCACTGAGAGCAAGAGCCTGAAAGAGGATCCCCTCAACTTCAATGTGTTCAACATCACCCTGGAAGTCATCAGTGCTTATGGGAACGTAGGGTTCTCGACTGGATACAGCTGCGCCAGGCAATTGAAAGGCGACGGTGTGTGCAGAGATTCATGGGTTGGATTTTCGGGTAGATGGAGTGCCAAGGGAAAATTCATCCTTATCTTGGTCATGTTCTTCGGCAGGCTCAAGAAATTCAATATGAAAGGTGGCAAATCATGGCACCTCTCCTAG 1578 0.4544 MNNFATFTPKRHPSCSFSPRSFRFLLHFLAFHVHPFFLQLCYFGILSLLGYLGLKLSTPRTPVRPKDLDLFYTSVSASTVSSMVALEMELFSNSQLILVTFLMFVGGEVFTSVLDLLLARYKFSQSVKNRVSTHPLSPTVHANHVELRSISVPHSESENHKPSDINVPKGTTVPFEDSDRLKYNCFTYLTFVVLGYLVVVQFVGFSLVSLYMTTVPSAKQVLKSKNIKIATFSLFTIVSTFASCGFVPTNENMMVFKKNSGLLLLILPHILLGNTLYPPCLRLVIMGLRKVSRREELRHLLKNFKDIGYDHMLSALHCWLLVATVLCLNVIQFVMFWLLEWNSESMEGLSVYEKVVGSFFQVTNARHAGESVFDLSSFSSAMLVLFVVMMYLPPYTTFLPVREEEKDVQRKGRSPLECLVLSQLSYLAIFIILICITESKSLKEDPLNFNVFNITLEVISAYGNVGFSTGYSCARQLKGDGVCRDSWVGFSGRWSAKGKFILILVMFFGRLKKFNMKGGKSWHLS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00016 525 Pfam Cation transport protein 420 476 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lapu4g00016 525 Pfam Cation transport protein 187 392 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lapu4g00016 525 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 28 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00016 Lapu-Chr4 292420 296981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00016 55 524 Inorganic Solute Cotransporters AT4G10310 48.852 2.29e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00016 K24976 - gmx:100797835 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00016 4 292420 296981 Lapu4g00016 4 292420 296981 ECH