Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00010 ATGGCACTCCCCACTTCTTTTACTGCATTTGCATTTCTCCTATCATCATCCTTATTGTTATCGCACATTCTCCTGATCTCGAGTGCTTCAGACAAAGAATTGCTCCTCAAATTCAAGGACTCCATTGAAAACAACCAGGCGCTGTCTTCATGGAATGAATCCACCCCTCCATGTTCAGATGAAGCATCTAACTGGCCTTACGTTCAGTGTTATAAGGGACACGTCTGGGGTTTGACGCTCGAGAACATGAGGCTCAAAGGGGTCGTTGACGTGCAAGCCCTCGAGGAGTTACCGTATCTCCGAACCTTAAGCCTCATGAGCAATGATTTTGACACTGAATGGCCTAACATACACGATATACAGGGTTTGAAGACCCTTTATCTTTCCAACAACAACTTTTTTGGAGAGGTTCCTGCTCAGGCTTTTCAGGGCATGAAATGGCTCAAGAAAATCCATCTCTCCAACAACCAGTTTACAGGTCTTATTCCAACTTCCCTCGCATCCATGCCTAGGCTTGTGGAGTTGAGGCTCGACGAAAACAAATTCGCTGGCTCCATACCCAATTTTGCTCATCCATTGAAATCATTTACTGTAGCTAATAATAAATTGGAGGGAGAAATACCAGACAGCCTCCGTGACATGCCAGTTTCGGCTTTCTCTGCAAGAAGTAGGGAATCATCAGATGAAGGAAGTCACAGGTCCCGCCAATCCAGCCGCAACAGCAAAAGAGACAGCATGAGGTTATCGTTTGTGAGGGATGACAGAGAGCAGTTTGATTTGCAAGAACTACTGAGAGCCTCAGCTGAGATACTGGGCAGTGGTTATTACAGCTCTTCCTACAAGGCTGCTTTGTTTAACGGACCAGTGATGGTGGTCAAGAGATTCAAGCAAATGAACAATGTGGGGAGGGAAGAGTTTCAGGAGCACATGAGACGGATTGGAAGGTTAAATCATCCTAATGTGCTTCCTCTCGTTGCCTACTACTACAGAAAGGAGGAGAAACTCTTGGTTACTGACTTTGTTCAAAATGGCAGCTTGGCTGTTCGCCTCCATGGATACCAAGCTCTAGGGAAATCAAGCCTGGACTGGGCAAGTCGGTTGAAGATAGTGAAAGGCATAGCAAGAGGACTTCAATATCTTAACATGGAGATGCCAAACCTAATTGCGCCCCATGGACATCTAAAGTCCTCCAACGTTCTTCTGAATGAATCTCTGGAGCCCATTCTGACGGACTATGGGTTGGTACCAGTGATAAACCAAGACCTTGCTATTGACATCATTGTGATCTATAAGTCCCCAGAGTATTTGCAGCATGGTCGCATCACAAAGAAGACTGATGTGTGGAGTCTTGGGATACTTATTTTGGAGATTCTGACGGGAAACCTTCCTGCTAACTTTCTACAAGGTAAAGGAAGTGAGTTGAGTTTGGCAAACTGGGTCCAGTCGGTTGTCTCGGAAGAGTCGAGTAATGAGGTGTTTGATAAGGATATGGAGGTAACCGAAAACAGTGAGGGGGAGATGATGAAGCTTTTGAAGATTGCATTGGCTTGTTGTGAAGGGGATGTGGACAAGAGATGGGACTTAAAAGAAGTTGTAGAGAGAATTGATGAAGTAAAGGAAACAGAGAACGAGGATGATAATTCCCGTCCTTCTTCTAATGCTGGCGAAGTTGATATCAAGCAGACTCAGTCAGATGAAAAGCTTGGTGCAGGACGCGTGGTGGCTGTGGCCATTGAGAATAACAAGACCAGCCAACACGCTGCCAAGTGGGCAGTGGACAATCTTCTTCCCAAGGACCAATGTCTCTTACTAATCCACGTTAGACAAAGACCATCTTCAGCGGATGCCGCGAACGAAGCTGTGGGCGACCACGAATCCAAGGAACTCTTTGAATCATTTCGAGTCTTCTGCAACAGAAAAAGTATACAATGCAGAGAAATGTTGTTGGACGACATGGATATATCTAAGGCATTAGTTGAAAGCATTTCCATGAATTCCATAGAGCTTCTTGTACTTGGGGCGCCATCAAGGGGTGGCCTTGTTAGAAGATTCAGAACAACGGATGTTCCAAGTACTGTGTCGAAGGGGGCGCCACCATTCTGCACAGTGTATATAATTTCTAAAGGAAAAATCTCAAGTGTGAGATCTGAAATAACATTTCAACATGCATGGTATATGTGTTCGTGCAGATCACCATTCACAAGGGCTGGCAGAGCATACGAGTCTTCAAAACTTCCCGATTCTGATATATCATTTGTGAGCAGCGGAAGGCCAAGTATTGATCGAATATTCCCAACAATGTACGACGATTTGGACAGTGCGAGTGGAATGGCCCCGGGTAGGCTTTCGAGTGGCTCGGATTATGACGCCAGAAGCTTCGCTTCTTCCCTGTCCTCCCAAGGACACAATAGCAATGATGACTACTCCTTCTCCTCGCAACCAAGGTTATCAGACATCACGGATGACGTTGAATTTGAGATGAGGAGGTTGAAGCTGGAACTGAAGCAGACGATGGATATGTACAGCTCAGCCTGCAAGGATGCTATGAATGCAAAGCAGAAGGCAATGGAGCTTCAACGTTGGAAAGCGGAAGAAGATAAAAAATTGGAAGAGTCGCAAACGGGTGAAGCCTCATCCATACAACATATGGAGATGGAGCAGGAAAGGATCAGAGCAGAAGCCCTCGAAAAAATAGCCGCATTGGAAGGACAGAAGAGAATGAGCCAGGTAGAGAGGAGGAAACCAAGTGAAGGCTTTGGACACGGCGCTGCCATGTACAGAAGGTACACGATTGAGGAAATTGAAGAGGCAACAAATATGTTTTCTGACTCTCTCAAGATCGGCGAAGGAGGTTATGGTCCAGTCTACAGGAGTGAACTGGATTGCACCCAGGTTGCCATCAAGGTCTTGAAGCCAGATGCAGCTCAAGGACGCGAGCAGTTTCAGCAGGAAGTAGAAGTGCTAAGTTGCATAAGACATCCAAACATGGTTTTGTTGCTGGGGGCATGTCCAGAGTATGGTTGTCTAGTGTACGAGTACATGGCGAATGGAAGCTTGGACGATTGCTTGTTCAGGACAGGAAATTCACGTCCACCTCTTCCATGGCAGCTAAGGTTCCAAATTGCTGCAGAGATAGCAACAGGTCTGCTTTTCCTTCACCAGACAAAACCAGAGCCACTCGTCCACCGTGACCTAAAACCGGGCAACATTCTCCTGGACCGCAACTACGTGAGCAAGATCAGTGACGTGGGGTTGGCCAGGCTGGTGCCTCCTTCAGTTGCTGACACTGTGACTCAGTATCGCATGACTTCCACGGCTGGAACCTTCTGCTACATAGACCCGGAGTACCAGCAAACGGGCATGCTGGGAATAAAATCAGACATATACTCACTGGGGATCATGCTTCTGCAATTGGTGACGGCGAAGCCTCCGATGGGTTTGACTCATCATGTTGGGAAATCCATCGAGAGGGGGACTTTTGCTGAGATGCTTGACCCAGCCGTTGAGGACTGGCCAGTGGAACATGCCTTGCATTTCGCAAAGCTTTCCCTGGGATGTGCCGAAATGAGGAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTGTTGCCTGAGCTGAATAAGCTCAGGATATTTGCTGAAGAAAGCATGTCGCCCATGATGATGTTTGGACTTCGAAGTGGTGGAGGTGGTGGGGCAGGGTATGTCCAGAGAAGCAGTAACTCATCCACACATTCTGTCAGTGCCTACTCTTTCTTTTTCTTTTGA 3765 0.4685 MALPTSFTAFAFLLSSSLLLSHILLISSASDKELLLKFKDSIENNQALSSWNESTPPCSDEASNWPYVQCYKGHVWGLTLENMRLKGVVDVQALEELPYLRTLSLMSNDFDTEWPNIHDIQGLKTLYLSNNNFFGEVPAQAFQGMKWLKKIHLSNNQFTGLIPTSLASMPRLVELRLDENKFAGSIPNFAHPLKSFTVANNKLEGEIPDSLRDMPVSAFSARSRESSDEGSHRSRQSSRNSKRDSMRLSFVRDDREQFDLQELLRASAEILGSGYYSSSYKAALFNGPVMVVKRFKQMNNVGREEFQEHMRRIGRLNHPNVLPLVAYYYRKEEKLLVTDFVQNGSLAVRLHGYQALGKSSLDWASRLKIVKGIARGLQYLNMEMPNLIAPHGHLKSSNVLLNESLEPILTDYGLVPVINQDLAIDIIVIYKSPEYLQHGRITKKTDVWSLGILILEILTGNLPANFLQGKGSELSLANWVQSVVSEESSNEVFDKDMEVTENSEGEMMKLLKIALACCEGDVDKRWDLKEVVERIDEVKETENEDDNSRPSSNAGEVDIKQTQSDEKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRPSSADAANEAVGDHESKELFESFRVFCNRKSIQCREMLLDDMDISKALVESISMNSIELLVLGAPSRGGLVRRFRTTDVPSTVSKGAPPFCTVYIISKGKISSVRSEITFQHAWYMCSCRSPFTRAGRAYESSKLPDSDISFVSSGRPSIDRIFPTMYDDLDSASGMAPGRLSSGSDYDARSFASSLSSQGHNSNDDYSFSSQPRLSDITDDVEFEMRRLKLELKQTMDMYSSACKDAMNAKQKAMELQRWKAEEDKKLEESQTGEASSIQHMEMEQERIRAEALEKIAALEGQKRMSQVERRKPSEGFGHGAAMYRRYTIEEIEEATNMFSDSLKIGEGGYGPVYRSELDCTQVAIKVLKPDAAQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRTGNSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGKSIERGTFAEMLDPAVEDWPVEHALHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRIFAEESMSPMMMFGLRSGGGGGAGYVQRSSNSSTHSVSAYSFFFF* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00010 1254 SUPERFAMILY Protein kinase-like (PK-like) 923 1201 IPR011009 -
Lapu4g00010 1254 Gene3D Transferase(Phosphotransferase) domain 1 1014 1217 - -
Lapu4g00010 1254 Gene3D Transferase(Phosphotransferase) domain 1 341 563 - -
Lapu4g00010 1254 FunFam Pollen receptor-like kinase 1 341 549 - -
Lapu4g00010 1254 MobiDBLite consensus disorder prediction 538 565 - -
Lapu4g00010 1254 MobiDBLite consensus disorder prediction 219 246 - -
Lapu4g00010 1254 ProSiteProfiles Protein kinase domain profile. 265 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00010 1254 CDD STK_N 573 709 - -
Lapu4g00010 1254 SUPERFAMILY L domain-like 29 214 - -
Lapu4g00010 1254 SUPERFAMILY Protein kinase-like (PK-like) 269 536 IPR011009 -
Lapu4g00010 1254 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Lapu4g00010 1254 SMART serkin_6 941 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00010 1254 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 574 685 - -
Lapu4g00010 1254 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Lapu4g00010 1254 MobiDBLite consensus disorder prediction 794 813 - -
Lapu4g00010 1254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1060 1072 IPR008271 GO:0004672|GO:0006468
Lapu4g00010 1254 ProSiteProfiles Protein kinase domain profile. 941 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00010 1254 Gene3D Ribonuclease Inhibitor 28 224 IPR032675 -
Lapu4g00010 1254 PANTHER OS02G0152300 PROTEIN 573 1222 - -
Lapu4g00010 1254 Gene3D Phosphorylase Kinase; domain 1 230 340 - -
Lapu4g00010 1254 Gene3D Phosphorylase Kinase; domain 1 915 1013 - -
Lapu4g00010 1254 FunFam U-box domain-containing protein 51 1014 1215 - -
Lapu4g00010 1254 MobiDBLite consensus disorder prediction 225 246 - -
Lapu4g00010 1254 FunFam pollen receptor-like kinase 1 234 340 - -
Lapu4g00010 1254 Gene3D HUPs 572 707 IPR014729 -
Lapu4g00010 1254 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 91 186 - -
Lapu4g00010 1254 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 917 1013 - -
Lapu4g00010 1254 Pfam Protein kinase domain 268 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00010 1254 Pfam Protein kinase domain 944 1195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00010 Lapu-Chr4 241740 253404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00010 271 494 Receptor kinase-like Gene Family AT5G35380 28.632 1.22e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu4g00010 Pkinase 5.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00010 - - mtr:11428996 907.516