Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03983 ATGAGGTGGTGCAGAGAGGTCTCTATGCCGGGTGGTCATGCGGGTGCGCTCTCACTCGCTCCTATAGTTACTGCTTCCTTTTGCGGCACAAGTCTTGTGCTTCCCTTTCAAAATTATCCCTTCAAACTCAAATTCCAATTCAAACTCGCTAACTCCTCTTCTCTTGCTCTCACCCATCATAAGCAGCTCCTACCCGCTGCACTGCCACAAACACGGACCCGTACTTCAAGGGAGGATGATTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCTGAAGTCGCCAAACACCGTTCTTTCTTGGAATTACAGGACCTCGACATCAATGGAAGAGTCTATCTGAACGAACAAGGGATTAATGCCCAGTATAGTGGACCATCGAAAGATGCTCTGGCGTATGTCAACTGGTTAAGAGAGGATAGTAGGTTTTCTGACATACTGGTTCAGATATCTCCATCAGAAAATGGACACACCTTTCCAGCGTTGAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGATATGTCACATCTTTCATTGCTTGATCCTTCAATGCGTGCTATACCTTTATCACCATCAGAATGGAAAGAAAGATTGGAAGCAATCAATAAAACTGATCTTAGAGCAAAAGATTATCATAACAGAAATTCCATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGGCTCAGCGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTGTCTCAGGAAGAGATCACTGCTTCGGATCCTTTATCAAATGTGGATAAAGAAAAAGCAAACATATTGATGTATTGCACAGGAGGGATTCGCTGTGATGTATATTCTACAATACTAAGGAAGCAGGGGTTTCAGAATTTGTATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCTGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTATATACTATTCTGGGACCACAACCGAAGCAGAATCAACTCCATTTTCTGGAGATGACAAGTTTGCAAAATGCTATGTATGTAGTTTGGAAGTCAGTGAATTGAAACATAGGAACTGCGCAAATCTTGATTGTAATTTACTTTTTCTATGCTGCAGAAAATGTGTAAAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAGTGGCACAACTATCGGGATATGGATTTGCTAGAGCAATGA 1314 0.4186 MRWCREVSMPGGHAGALSLAPIVTASFCGTSLVLPFQNYPFKLKFQFKLANSSSLALTHHKQLLPAALPQTRTRTSREDDFDFVVVNFYHFVFIQDPQAEVAKHRSFLELQDLDINGRVYLNEQGINAQYSGPSKDALAYVNWLREDSRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGDMSHLSLLDPSMRAIPLSPSEWKERLEAINKTDLRAKDYHNRNSILLDVRNGYEWDIGHFRGAQRPSVDCFRNTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRKQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYSGTTTEAESTPFSGDDKFAKCYVCSLEVSELKHRNCANLDCNLLFLCCRKCVKDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHNYRDMDLLEQ* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03983 437 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 76 422 IPR020936 -
Lapu3g03983 437 Pfam UPF0176 acylphosphatase like domain 84 175 IPR040503 -
Lapu3g03983 437 CDD RHOD_YceA 199 318 - -
Lapu3g03983 437 Gene3D - 191 350 IPR036873 -
Lapu3g03983 437 ProSiteProfiles Rhodanese domain profile. 222 325 IPR001763 -
Lapu3g03983 437 Pfam Rhodanase C-terminal 327 408 IPR022111 -
Lapu3g03983 437 Pfam Rhodanese-like domain 222 317 IPR001763 -
Lapu3g03983 437 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 188 339 IPR036873 -
Lapu3g03983 437 Gene3D - 70 178 - -
Lapu3g03983 437 SMART rhod_4 211 322 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03983 Lapu-Chr3 63202210 63211056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03983 82 433 Sulfurtransferasese or Rhodanese AT1G17850 67.403 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03983 - - gmx:100814358 753.436