Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03978 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTCGATGATCTCCGCCTCAGGAAACAGCGAATGGCTTCGTCTCACACTTCAAACCAATCCCACCATTTCCCTATAGATGCGTATGCTTACACAAAGCAAACATACAGAGGATCCAGAAATACGCAAGCTAATGAATTTGTGAGTTCCAGAACTGGGGTGACGCTGAATAGTTCTAATAGAAGCCACAGATCAGTAAACAATGGGCAAGTTTCAAACCAGATGGTTCCATATGGGAAAGGTCAGAGCTCAAGGCAAACTGGTGATATGTCCCTTGCCCTGGCTTTTGCCTTTGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAAATTAACAGAGGAACATTGGAATTCAGCATGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTATCCAAATAGACGAAATATCCAAAGGGGCACAAAAACTAAACCAGATTTTGAGAGCCTGCTCCAATGGTCTTAACATGGACACATATTCAATACAATTTGCAAAGGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAAGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATTATTACCTCTCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGATGATAACGATGACGCAGGGATGGAAATGCAACTGACAAGACCAAAACCAACTTTCTCTTTCGAAAAACATGCTACTCAGAACACCCAACAACTTGGAAAGGCCACTTTCATGCAGAGGCCAATTACTCTTACTAGCTCTAAGGAAGGCAGCAACTCAAATAATGAGAACAAACCTGTGAAGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTATCTCTGGCATTAAGAATGTCAATGCTATTGTAGAAGGGAAAAACCTGACGGCCTCCAACCCGGAGAAGGGCAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACATCCTTCCTGACAGAGTGGAAATGGAATCAAAACACGTGATGCTTCAGAAAAGGGAAGGAATATCACCCAAACATACTGCAAAAGGAAACACTAAGAAGACTGAACTGCAGAGCAAAGAAACAGATAATTTGGTGCCTATAAAAAACCAAAGAGTGATAGAAGCCTTCAAAACGCCTGCAACTCGGGGAGAAGAGATGATATCTGGGGCAGATAAAAATTTGCTTGTAGAAAAAACCGGCTCTGAGTTGTCTCTTCAGAATGGAAAACCACTATTGAGAGATCTGGATGAAATAAAAGCACTCAAGGGATTTGACAAGCCCAGCATAAAAGTTGACAAGCAGACTAAAAGTTCCGCTGAAAAGAATCTTACCAGAGGAAGTCAAAAGGATGTTCGGGAGATAGGAAGAAAAAAGGATCACCCAAATAACAATAACAGGGAACAGAAAGGCACTCTAAAGGGAAGAACCAACTATCCAGTTCTTAACAATATGATATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGTCCTCTATTCAGGAAGACAAGGATGTCAATGCAAACATTGTTCAGCCTGAAAAAAGACACACAAACAGGAACATCATGAACAATGAAAAGAAATCTCGGAACAATAATGGAATTCAAAAGACACACGTACTCTCCAAAAATGGGCTTCACGAAGAAAAGCATCGCAGAGAACAACAACTCCTGGTGAGGGAAGAACAAATGTTGATGATGAGACCACAAGGAGGGAGTGAAATCACATCAAAGAATTCACCAAAATCCCCTCTTCCTCAGAAGAAGCAGCTATCAATGAACCAGGGCACACCGTTTAAGAAAAGCTCTGGAGAAAAAACTGTTGCTGCTATGAAATTGGAAGGCCTTTTAACTAACCATTATGATCTTGTCAGAGATGAAGGATCCAATTACATAAATGAGAAAGTAAAAGAAATTGTCCGTAGGAAGTCAGGCCAAATGTCCTCTCCAAGAGATCAAGAATATGAACGAGCTAAGCGAAGTGGCATTAGAACTTTGATGGATGAAAAACACGTCTATAAACTGGCCAGCAAGAAAATAAAGAATACCAGAAAGCAAAATGTAGACGTGATTGGAAAGATCGATCAAGTGTTGACTGCAAGAAAGGGAGCCAAGCTTATCATTAAACAAGGAAAACAGCAGATTCACACTTCTGACAAATTTGAATTTCTGAATGAAGCAGAACGAGAAAGGATTAGCTTGTTCAAAGAAACAGATGCACACATCATTAGCCGCAGTGAACAAGTAGTCGTGGATGTGAATGAACCACTGGATATGAGGCGCCAACCCCATAAAGAAGCTGAACTACCTCCTACATTATCCAGTTCTGTTAGTGGAGCACTTCAAAGCCAACAAGATTTGGTAGAAATAGTTCCCAATGATTTGAATTGTCGAGATGTGTTATTATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAGGCTGCACTACAGAAAACAAATGGAATTCAGGAAGACAGACTGCGTGTTAAGCACTCAAACCTAGAAGATCAGAATATTTATGAAAAAAGCTTCGAACGGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGCACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAAGGCGGTCGACGGGAGATTCAAGACGAAGGTAGCAAACTGATATTAGATTGTGGGTACGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTAAAAAAAGTTCATAGTTATTCAAGGATATCAACGGGTACCACCAACATAATATACTTTGATGAGTTAGTTAGGAAGCTGAATAAAGACATGGATAAGCTCAAGCTCTACGGTAGGAAAAAGGGCGGCCAAGTTGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGACAATGATCCGGACGTGAACTGCATGTGGGATTTGGGTTGGAATGATATGACAGTTGCATTTATCGAGAAATACGATGTTATAAGGGATACAGAAAAGCACATTCTCAGTGTTCTACTGGATGAGATCACCCTGGATTTTTGCATGTTCAATCAGATAACGAAACAGTAG 3159 0.4058 MAKRSDFAQKLLDDLRLRKQRMASSHTSNQSHHFPIDAYAYTKQTYRGSRNTQANEFVSSRTGVTLNSSNRSHRSVNNGQVSNQMVPYGKGQSSRQTGDMSLALAFAFENGGKLKRSDSIMGFLHQINRGTLEFSMSERQLASTSNYPIQIDEISKGAQKLNQILRACSNGLNMDTYSIQFAKELLQGAIDLEESLKMLVDLQNNSQFIITSQKKNRITLLEEDNDDNDDAGMEMQLTRPKPTFSFEKHATQNTQQLGKATFMQRPITLTSSKEGSNSNNENKPVKRQVSQKRSTKTSSISISGIKNVNAIVEGKNLTASNPEKGRIPNVIAKLMGLDILPDRVEMESKHVMLQKREGISPKHTAKGNTKKTELQSKETDNLVPIKNQRVIEAFKTPATRGEEMISGADKNLLVEKTGSELSLQNGKPLLRDLDEIKALKGFDKPSIKVDKQTKSSAEKNLTRGSQKDVREIGRKKDHPNNNNREQKGTLKGRTNYPVLNNMISQLEQVKERSEVKSSIQEDKDVNANIVQPEKRHTNRNIMNNEKKSRNNNGIQKTHVLSKNGLHEEKHRREQQLLVREEQMLMMRPQGGSEITSKNSPKSPLPQKKQLSMNQGTPFKKSSGEKTVAAMKLEGLLTNHYDLVRDEGSNYINEKVKEIVRRKSGQMSSPRDQEYERAKRSGIRTLMDEKHVYKLASKKIKNTRKQNVDVIGKIDQVLTARKGAKLIIKQGKQQIHTSDKFEFLNEAERERISLFKETDAHIISRSEQVVVDVNEPLDMRRQPHKEAELPPTLSSSVSGALQSQQDLVEIVPNDLNCRDVLLLQDPVAADERFVTGEAALQKTNGIQEDRLRVKHSNLEDQNIYEKSFERPLTESENCLKWILVMSQLFVNTAEALFKLNIPFNVLQGGRREIQDEGSKLILDCGYEVMKRKGIRQELKKVHSYSRISTGTTNIIYFDELVRKLNKDMDKLKLYGRKKGGQVDVEDYLPKMLEHDVYDNDPDVNCMWDLGWNDMTVAFIEKYDVIRDTEKHILSVLLDEITLDFCMFNQITKQ* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 447 484 - -
Lapu3g03978 1052 PANTHER OS01G0228800 PROTEIN-RELATED 8 1044 - -
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 447 494 - -
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 588 624 - -
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 270 300 - -
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 589 621 - -
Lapu3g03978 1052 MobiDBLite consensus disorder prediction 65 93 - -
Lapu3g03978 1052 Pfam DUF761-associated sequence motif 326 342 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03978 Lapu-Chr3 63155107 63168819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03978 1 389 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 35.980 5.24e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03978 - - pvu:PHAVU_002G333000g 1715.28