Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03977 ATGGCGGACTCAAACACAAGCTCAGTTGATGTGATTTTGGAGTTTCTTCGGAGGAACCGATTCACCAGAGCCGAGGCAGCTTTGCGCAGTGAGATCAATAATCGCCCTGACTTGAATGGCTTCCTTCACGAACTCACATTGGAAGAAAAGGCCTCACATGACGTGCCTCAAAATAATAAGGGGAAGCCTGTGCTTGAGATTCAAGGGGTGGACACTCTTGAAGTTTCTAAAGAACTGATCGTCACTGAAATCGAGTGTGGGAATGGTCGAAATGCCACCGAAAGCAAATGGAAAACTGCTGCTCCCACTTTGGTCGAACGGAATAAATCTGATGACGCGGTTCCGACTAGTGATAAGAACTTCATTTTCTCTAAGACTTCAGAAGATGGTATGCTTGATTTATACTCATTGAAGTTCAACCCTAGCAAAGCTCCTGTGGAGCCTTACCAAAACGATGCTGGTAGTAGGGCTAATAATTCTTTGAGTTTGACGGCCACTGTATCTCAACAATCAAAACGTCAAACCAACGAAGCTGTGGATCTAAGTGTTGTCAACACCAGTTCAAAGTCCGGGGAGGAAAATGTTGCCCTTGCTGATAAAAAATCTCTGTGGCCTGGAAGTAGTAGTAAAGCCTCTGTGGATCTTAGGTACGACCTTGTGCAATGCAAAGAACCTATGGAACTTGATCGGCAACTTAAATTCAACAGTTCATCTCTTAAATTGAACTTTACAGATAGTCTCTGGTCAAGAATTGACGAGAATGTGAATTCGTCTTCAGACTCCTGGAAAAATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGGGGACGTGTCTACAAGCTTTGATGGTGCCACTTATTCGGACAAAAAAGAGGAGAAAAAAAAGGTAGAAATTAGTGATACCCGAACATCTATAAAAGAGCAGGTGGATGAATCAGGTAGGTCAATTTACTTGGTCAAGACACCAGTCAGTTCTGAACAGAAGTTGATTGGCAGCTTAAGTTTTCCTCTTCCACCTGAAAATGAGAAGGAAGAGTTTCCAAGGCTTCCTCCAGTTAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAAGAGAAGTTTGAGCGAGATGGACCAACTTCAAAAACCCCTGGCACTGACAGTACTTTACTTATTGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGAGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGATTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCCGACGAATATGATGACGATGAGGATGTTGGGTACATGAGGCAACCTATTGAGGATGAGACCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAAGGAACTGGGCATGAAAGTGTTCCAGATCCTCAGGAAAGTGGTCTGGCCAAAGATGAAGATGATGATCAATCTTTTGCCGAGGAGGATTCTTACTTTTCTGGGGAGCGATATCTTCAGGCAAATAATGTTGAACCAGTCACAGCTACTGATGATCCTATTGGTCTAACAGTTACTGAGTATGGAAGGACCAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTGATGTGTGCAGAACCGGTCTGGCGGGGCTTTGTCCCTCAAACTAATGAACTCATCATGCTAGGAGACGGGAGGGTGTTGAATGATAATGTAAGATCACGACTAGAGGACATCAATGTGGATGATGATCAACATGGTTCGGTTAGGTCAATTGGGGTAGGGATCAATAGTGATGTTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGAGATTTAGAATATTTCCATGATCCTGATGCTGGGCTTGGTGGTTCCAGGCACTCTCATCGTGATTTGGATAAAAAATCTACTAACAAATTAAACAAAAATAAGAATCATGATAAGAGTGAGTCAAATAAATATGTCATAGGATATGACAGAGATGCAGAGTTCCAGATAAAAACTCATGGTGATGGGAACTTCTCATTTCCCCTATCTTTGAATGACAGTGAGATGATTCAGGCTTCCACCAATAAGTCCCTGTGGTCAAATAACGGCATCGCTGATGAAACTGATGACTGTCTTAGTGCATTTGTGGAAACTGATGACATGCTTGCTTCGTGGAGGCGAAAGAGCAGTGATTCATCACCTGTTAAAAGTTCTAGGGATGATAATAATGCCAACAATGTAAGATCCACAAACTCTTCTCCAACAACAATTTCAAATTATGGATATTCTGAAAGAGAGCATGTGAAGGTAGAAGAGGATGAAAAAACTAGACTTGCAAGGGAAGATGATCTAGGAGCATCATTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAAGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTTTCGGAGTATCTGGGATCTGCAGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAACAAGCATGATCCTGGAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATCTACTAATAGTATGCGAACTACTTAAAGCAAACTTGTACGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACGATGCCAAGATTACAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTGATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAGAGCTATAGTAGATGTGAGGTGAAGGTCATTGACCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTACGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGATAAGAAGATTGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCGCCTGCAACATTACTTGCCCGGGTGATTGGGATCATTGGTCCAATTGATCAAGGTATGCTTGCAAAAGGACGGGACACCTACAAGTACTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTAGAATACTTGATTCCAAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGATTTTGTGGCTCACTTGCTAGAAGTCAACACTAAGAAGCGGCCCTCTGCATCTGAAGCCCTGAAGCATCCATGGTTATCGTACCCTTACGAACCCATATCATCTTGA 3564 0.4141 MADSNTSSVDVILEFLRRNRFTRAEAALRSEINNRPDLNGFLHELTLEEKASHDVPQNNKGKPVLEIQGVDTLEVSKELIVTEIECGNGRNATESKWKTAAPTLVERNKSDDAVPTSDKNFIFSKTSEDGMLDLYSLKFNPSKAPVEPYQNDAGSRANNSLSLTATVSQQSKRQTNEAVDLSVVNTSSKSGEENVALADKKSLWPGSSSKASVDLRYDLVQCKEPMELDRQLKFNSSSLKLNFTDSLWSRIDENVNSSSDSWKNCSVKTVFPFSKGDVSTSFDGATYSDKKEEKKKVEISDTRTSIKEQVDESGRSIYLVKTPVSSEQKLIGSLSFPLPPENEKEEFPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKTPGTDSTLLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDETWFLAHEIDYPSDNEKGTGHESVPDPQESGLAKDEDDDQSFAEEDSYFSGERYLQANNVEPVTATDDPIGLTVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDINVDDDQHGSVRSIGVGINSDVADIGSEVRESLVGGSSEGDLEYFHDPDAGLGGSRHSHRDLDKKSTNKLNKNKNHDKSESNKYVIGYDRDAEFQIKTHGDGNFSFPLSLNDSEMIQASTNKSLWSNNGIADETDDCLSAFVETDDMLASWRRKSSDSSPVKSSRDDNNANNVRSTNSSPTTISNYGYSEREHVKVEEDEKTRLAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVSEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNTKKRPSASEALKHPWLSYPYEPISS* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03977 1187 Gene3D Phosphorylase Kinase; domain 1 870 957 - -
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 759 794 - -
Lapu3g03977 1187 FunFam Serine/threonine-protein kinase ppk15 955 1179 - -
Lapu3g03977 1187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1002 1014 IPR008271 GO:0004672|GO:0006468
Lapu3g03977 1187 ProSiteProfiles Protein kinase domain profile. 876 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03977 1187 SUPERFAMILY Protein kinase-like (PK-like) 865 1180 IPR011009 -
Lapu3g03977 1187 SMART serkin_6 876 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 757 809 - -
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 480 506 - -
Lapu3g03977 1187 Gene3D Transferase(Phosphotransferase) domain 1 930 1178 - -
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 480 513 - -
Lapu3g03977 1187 FunFam Putative serine/threonine-protein kinase dyrk2 870 957 - -
Lapu3g03977 1187 CDD PKc_DYRK_like 876 1178 - -
Lapu3g03977 1187 Coils Coil 828 848 - -
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 648 688 - -
Lapu3g03977 1187 PANTHER DUAL SPECIFICITY PROTEIN KINASE 412 1178 - -
Lapu3g03977 1187 MobiDBLite consensus disorder prediction 643 688 - -
Lapu3g03977 1187 Pfam Protein kinase domain 876 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03977 Lapu-Chr3 63140773 63153869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03977 875 1173 MAP Kinase Gene Family AT5G19010 30.721 2.80e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lapu3g03977 Pkinase 1.1e-50 CL0016