Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03968 ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAGTTCTGCTATCATTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACCGCACCTTTATATGTATTTGGGACAATGCGAGCGGGAGATCTTGCATCAGATCAGGAAGTCGTTTATGAACTCTTCTCCTTCATTTTCTGGACACTCACAATAATTTCTTTGCTTAAGTATGCCTGTATAGTGCTGAAAGCTGATGATGAAGGAGAGGGTGGCACTGTTGCTTTATACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACAGAAGTGCAAACGAGGTAATGCTTTACGAGGAGAAAAGTTCTTGTAAGATCAAAGCCGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTCGGTTCCTGTATGACCATTGGGGACGCAGTGCTCACTCCAGCACTTTCAGTTTACTCAGCTTCAACTGGAGTTCAGATATCCTTGACAGACATATTGCAAGACATATTTGCCTCGTCACCACATACTCAGGATTCCGTGTCAAAGGCTCTAAAAACATATGTACCTGTTCCCTCTGCGTGCGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTCGCACCAATAATTGCTGCTTGGCTGTTGTTTGTCGCTGCTGTCGGAACGTATAACATTTTCCGGTGGGATGTAAAAATTATCTATAAAATATCCCCATTCTACATATACAAATTCATCACAAAGATTGACATTCCCAGATGGAGATTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGACCTGGGCCATTTCTCCAAGAAATCAATCAAGATTACATTTATATGCTTGATCTACCCGCTTCTTCTTTTATGCTATGCTGGTCAGGCGGCATATATCTCCAAACATTTAACTGTCTCTGATTTTAATCATCTTAGTCAATCTATGCCACGTCATTGCAAACACTTGTTCATAGTATTATCCCTACTCTCTTCAGCTGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGCCTCGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAAACTATAAACGGGCAGATTTACATCCCCGACGTCAACTGGTTATTGATGATTTTCAGCCTCACTGTCACAATTGGTTTCAGAGACATTGTGAAAATTGGCAATGCCACAGCTTTGGCTATTATATGTGGAATGCTTGTGACAACCAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAGAAGAATTTGATGGTGTCTGCGTGCTTTCTTGTATGTTTTGGATTCCTAGAGGTTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGAGCGTGGTATCTGGTTGTTCTATTGGTAGTTTCCATGACAGTCATGCTTTCATGGCATTATGGAACGATGAAGAAGTACGAGTTTGATTTGCAAAACAAGGTATCAACTGAGTGGCTAATAGATATCAGTCCAGGCCTTGGGATTTCCAGGGTACCCGGAATTGGCTTCATTTACACGGACATTGTAGCAGGAATCCCAGCTTTCTTTTCACATTTCATTACAAATCTTCCTGCATTCCATCAAGTGTTGATCTTGGTGTCATTCAAGTCTATACCTGTGCCTTACGTCCCAGAAAGTGAGAGGTATCTCATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGCTGCATTGTGAGAAGTGGATATTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGAAGATAATTCGTTCTATCGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCCACGGTTTGCCCAGATGAAAGAATGATCTTTGTGGGACATGCAACGGTTGATGGAAATGCTTTAGTCCCTTTGGATGATTTTGACTCATCATGCATGGGGCAAAGCCAGGTGAACAATGAATCTCAGATAAGTCCGGTAGATGAGGCGTTGGAGAGTAGCAGTGGTTGTAAAAAGAGAAAAAAGGTTCGGTTCACGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTTAGGAAGGAGCTACTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGACAGTCACATTTAGTGGTGCGTGATGGCTCAAACTTTTTCAAGAGATTCTTAATAATGGTCTATCGTTTCAGCGAAAAAAATTGCCGGGAACCTCCTGTGGCTCTTAAAATCCCTCATGCCGCTCTTGTAGAAGTTGGTGTAGTATGCACTATATAA 2370 0.4198 MDSHLFDQDKKKTWKQTVLLSFQIVGIVYGQLSTAPLYVFGTMRAGDLASDQEVVYELFSFIFWTLTIISLLKYACIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDRSANEVMLYEEKSSCKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQISLTDILQDIFASSPHTQDSVSKALKTYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLLFVAAVGTYNIFRWDVKIIYKISPFYIYKFITKIDIPRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYISKHLTVSDFNHLSQSMPRHCKHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATALAIICGMLVTTSLMSLIIALYWEKNLMVSACFLVCFGFLEVAYLSACLLQFHKGAWYLVVLLVVSMTVMLSWHYGTMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESTVCPDERMIFVGHATVDGNALVPLDDFDSSCMGQSQVNNESQISPVDEALESSSGCKKRKKVRFTLPHNSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGSNFFKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVVCTI* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03968 789 NCBIfam potassium uptake protein 20 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu3g03968 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lapu3g03968 789 Pfam K+ potassium transporter 22 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03968 Lapu-Chr3 63063473 63067874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03968 1 789 Inorganic Solute Cotransporters AT1G70300 45.149 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03968 K03549 K12236 gmx:100801073 1377.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03968 3 63063473 63067874 Lapu3g03968 3 63063473 63067874 ECH