Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03896 ATGTCTACTTCTGTAACTAGGCATGATGTGTTTCTGAACTTTAGAGGGGAAGACACCCGTGACAACTTCATCAGTTACCTTCATGCAGAACTATGCAGGAAAAATATTGTAACATATGTTGATGACAGGTTACCCAGGGGCGCAGATATTTCTCCTGCACTCCACACTGCAATAGAAGAGTCAAAGATTTATGTCCTAGTTTTCTCCCAAAACTATGCATCTTCCACCTGGTGCTTGAATGAACTCACTAAGATACTGGATTGCAAGAAGAGACATGGAAGGGATGTGATACCAGTTTTCTATAAGGTGAATCCATCAACTGTCAGGAAGCAGCAAGAAAGATACAAAGAAGCATTCAAAGAGCATGAACAGCGGTTTAAGCACAACATGGACAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGCTGGGATTCAAAAGTTACCAGGCCAGAATGTACACTTGTTGAAGGAATTGTGGAAGATATTTTGAGAAAATTGAATCGTTATTCTACCAGTTATCATCATCAAGGAATCATCGGCATTGAAAAACATATTGAAGGAATTGAGCCCTTGTTGTATCTTGAGTCACTGGATATTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATTGCTGGTTTAATATATCACAGATTGGCATCGCAGTTTGGTTCCAGCAGCCTTGTTTTAAACGTTGAAGAAAAAATACGAAGACATGGAATAGACAGTATCAAAACCAAATATCTGTCTGAGCTTCTAAAGGAAGAATTCCCTTATTATTTATTCTCTTGCAATGAAAGGCTCAAACAGACAAATGTTCTCCTCATTCTTGATGATGTTAACAATTTAGTTCAACTTAAAGAATTAATAGGAGGGCGTGATGATTTTGGGGAGGGCAGTAGAATCATTGTGACCAGTAGAAACAGGCAAGTGCTTAAGAATGCTGGAGCTGATGAAATCTATGAAGTCAAGGAATTGAATTTTCACGATTCTCTAAAACTTTTTAGTTTACACGCTTTTAAACCAAAATCTTCACAAGAAATTGCTTACATGGACCTGTCCGTAAAGGTGTTGAGATACGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGCTCATTGCTTTATGACAGAACAAGAGAAGCATGGGAAAGTCAGTTGCAAAAGTTGGAAAAGTTCCAAGATCTTGAAATTTTCAATGTATTAAAACTAAGTTATGATGGGCTTGATGAGGAGCAAAAGAATATATTTCTTGACATAGCTTGCTTTTACAGAGGACATGAGGAGATTGTGGTGGCAGAAACACTAGATGACTGTGGTTTCTCCTCTAAGATCGGAATGGATGTTCTGAAAGATAGGGGCCTGATTTCTGTCTTGGATGGTAGAATTGTGATGCACGATCTAATACAAGAGATGGGTAAGGAAATTGTTCGTAAAGAGTGTCCTCAGCATCCTGGAAAACGTAGCAGATTATTTAAGACTGAGGAAACTTGTGGTGTTTTAAAAAAGAAAGAGGGGTCGGATGCAATACAGTGTATATTACTAGATATGAGCAAAATACAAAAAGTTGAAGTATATGCACAAACTTTCGAAAAGATGAACAGTCTTAGGATGCTTATGCTCTATAATTCTAGTTCTTGGCCTCGAGAAGAATCAGAAGTGTTTCTTGAATCATCTCTTGTAAGTCTACCAGACACTTTAAAGATTCTTTATTGGAAAGGTTTCCCTCAAAGATCTTTGCCACCGAACTTTTGCCCACAAAATCTAGTGAGACTCGAAATGCCAGGCTGCCATCTTGAACAACTCTGGGAAGGAGATCAGATTTTACCGAAGTTGAAAAGGCTCAACCTGAGTGGTTCTCTGGAACTTACTACAATACCAGACCTTTCTCTGTCACCAAACATTGAAGAAATAATTCTGAGTCATTGTGAGAAGTTGGTTGAAGTTCACTCTTCGGGATCTCTCAGCAAGCTCAGTTGTTTGTGTTTAGATCATTGTTCTGACCTGAAGAGTGTAACCATTCCCAGCAATATTCTGTCCAGATCACCAGGATTGGTTCTTCTCTCCTGGTGTGGCAAGCTTGAAATGTTTTCAACCAGTCAAACTCAATTATGTTATTCTCCATCATTATCATTAATCAGTCCAAGATTCCCTCATGTGAAACTGGAGCGTCAACATGCAACTTTCTCAACATCACCTCATGAGAAACCGGAGCATCAAATTTTAATTTTCTCAAGAAGCCGTGGTGAGGATCCGGAGTATAACCGTCAAACTCTCTCAAGATGCGCTCCTCGTAGGATACGGAAGGCTCTACGTGATATTTCCTCGAGATTTCAATCCAGTGAAATTTTCTCAATTACTTTTGACAGATATGAGGAAGAAGAAACAGAAGTTGATAATAATAATAATAATAATAATAATAATAATAATAATGTGTACTTACGATGTGTAGAAGTGTCGGCAGAACTCAAAGAAGGTGTGCCCTTAAACTTTCAAAGTATCAAGAAGCTCTGTTGCTTAGATCTCTCTCACTGTTCCTCCCTTACAATCCTTCCATTTGACCTTTCTGAGATGAAATTCCTAAAGCAACTTTTCCTCTGTGGTTGCTCAAAATTCGAAAATTTTCCCGAGATTGAGGAGACGATGGAAGATCTAGCGGTGCTCAATTTAGACCACACAGCTATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTGAAGAACTGAGTTTGAACAATTGCTCGAATCTTGAGATTATTCCATCTCCCATTGGAAGCCTCACCAGACTATGCAAGTTACACCTTACCCACTGTAAATCACTTCAAACTTTTCCAAGCAGCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGCATGGTTGCTTAAGGCTGAGGACCTTCCCAGAGATCACGGAGCCCGCACAAACTTTTGCTCACATTAAATTAACACAAACGGCTATTAAAGAACTGCCTTCCTCATTTGGCAATTTGGTTCATCTTCGATCCCTGCAGCTCAACAAATGCACTGTTCTCGAGTCACTTCCAAACTCCATTGTTAATCTAAACCTTCTCTCTAAACTTGATTGTTCCGGGTGTGCCAAATTAACAGAAATCCCAAGACACATTGGTCGCTTGTCGTCGTTAATGGAACTGTCTCTCAGAGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGTTCATCTTTCAAGCTTGAAATCACTTGATTTAAGTAAGTGCGAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGTCAAATTCTCTTGTTCGGAACCCCTCAAATCTAAAAGAGGGTGTCTTCAAATTTCATTTGACCAATGCTCAAGAACTGGATTCAGGTGCTCATGCTAGCATTGAGGAGGATGCAAGGCTAAGGATGACCGACGATGCATATAGGTCTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGATTGGTTCCATTTTCGAGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGAGGATAGACTCATTGGTTTTGCTTTGTGTGTGGTTTTTGAACTGTTAGAAACGAATGATACTAAAGGTAGATATGGTTCTTTTGGTTACAGCCTAAAATTTGAATCTGATGATGATGGCACACAGATTATTCCAAATAATGATGTGTTAAACAGCTATTTCGAATGGAATGGTGAAGACAGAGGTGTTGATCAAGATCACACGTTCGTATGGAAATTCAACTTGGAGTCCCTAAGGACGAGAGGCATGAACCTTAGGCTCTGTGAAGCTCGCAGCTTCACTTTTGTGATTACTCCGTTGGATGATGGGTTTCAGCGAGATTTCAGATCAATTGTGAGTGAGTTCAAATCAGTTGTGAGAATAAAAGAATGCGGCATATGTCCTCTTTATACCAAAGAGAAAGACGATAAATATAGTGGTAGCCATAGATATTCAGAAAATGAGATTGAAGAATCCAGTGGAAGCAATGTTGCAGAGTCTTTAAGGGAAACAAATAAAGATAGGAAGAGGAAGGCCCAAAGCTACATTTTTTCTTTCTTTCTTTTTCTTTTTTCTTTTTTCTTTTATCATCTTCTCTCTTGCTCTTCTCGTAATTAG 4200 0.3957 MSTSVTRHDVFLNFRGEDTRDNFISYLHAELCRKNIVTYVDDRLPRGADISPALHTAIEESKIYVLVFSQNYASSTWCLNELTKILDCKKRHGRDVIPVFYKVNPSTVRKQQERYKEAFKEHEQRFKHNMDKVQGWKDALTEAAGLSGWDSKVTRPECTLVEGIVEDILRKLNRYSTSYHHQGIIGIEKHIEGIEPLLYLESLDIRIIGICGMGGIGKTTIAGLIYHRLASQFGSSSLVLNVEEKIRRHGIDSIKTKYLSELLKEEFPYYLFSCNERLKQTNVLLILDDVNNLVQLKELIGGRDDFGEGSRIIVTSRNRQVLKNAGADEIYEVKELNFHDSLKLFSLHAFKPKSSQEIAYMDLSVKVLRYAKGIPLALQILGSLLYDRTREAWESQLQKLEKFQDLEIFNVLKLSYDGLDEEQKNIFLDIACFYRGHEEIVVAETLDDCGFSSKIGMDVLKDRGLISVLDGRIVMHDLIQEMGKEIVRKECPQHPGKRSRLFKTEETCGVLKKKEGSDAIQCILLDMSKIQKVEVYAQTFEKMNSLRMLMLYNSSSWPREESEVFLESSLVSLPDTLKILYWKGFPQRSLPPNFCPQNLVRLEMPGCHLEQLWEGDQILPKLKRLNLSGSLELTTIPDLSLSPNIEEIILSHCEKLVEVHSSGSLSKLSCLCLDHCSDLKSVTIPSNILSRSPGLVLLSWCGKLEMFSTSQTQLCYSPSLSLISPRFPHVKLERQHATFSTSPHEKPEHQILIFSRSRGEDPEYNRQTLSRCAPRRIRKALRDISSRFQSSEIFSITFDRYEEEETEVDNNNNNNNNNNNNVYLRCVEVSAELKEGVPLNFQSIKKLCCLDLSHCSSLTILPFDLSEMKFLKQLFLCGCSKFENFPEIEETMEDLAVLNLDHTAIQALPSSLCRLVGLEELSLNNCSNLEIIPSPIGSLTRLCKLHLTHCKSLQTFPSSIFKLKLRKLDLHGCLRLRTFPEITEPAQTFAHIKLTQTAIKELPSSFGNLVHLRSLQLNKCTVLESLPNSIVNLNLLSKLDCSGCAKLTEIPRHIGRLSSLMELSLRDSGIVNLPESIVHLSSLKSLDLSKCEKLECIPQIPPFLKQLVALDCPSIRRVMSNSLVRNPSNLKEGVFKFHLTNAQELDSGAHASIEEDARLRMTDDAYRSVFFCFPGSAVPDWFHFRGKGHSVTINEDLSFCSEDRLIGFALCVVFELLETNDTKGRYGSFGYSLKFESDDDGTQIIPNNDVLNSYFEWNGEDRGVDQDHTFVWKFNLESLRTRGMNLRLCEARSFTFVITPLDDGFQRDFRSIVSEFKSVVRIKECGICPLYTKEKDDKYSGSHRYSENEIEESSGSNVAESLRETNKDRKRKAQSYIFSFFLFLFSFFFYHLLSCSSRN* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03896 1399 Coils Coil 801 821 - -
Lapu3g03896 1399 Gene3D - 3 174 IPR035897 -
Lapu3g03896 1399 Gene3D Ribonuclease Inhibitor 988 1147 IPR032675 -
Lapu3g03896 1399 Gene3D Ribonuclease Inhibitor 788 987 IPR032675 -
Lapu3g03896 1399 Pfam Leucine Rich Repeat 598 617 IPR011713 -
Lapu3g03896 1399 SMART till_3 7 146 IPR000157 GO:0007165
Lapu3g03896 1399 Gene3D - 175 332 IPR027417 -
Lapu3g03896 1399 Pfam TIR domain 8 185 IPR000157 GO:0007165
Lapu3g03896 1399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 710 IPR044974 GO:0006952
Lapu3g03896 1399 Gene3D Ribonuclease Inhibitor 501 733 IPR032675 -
Lapu3g03896 1399 PRINTS Disease resistance protein signature 371 385 - -
Lapu3g03896 1399 PRINTS Disease resistance protein signature 207 222 - -
Lapu3g03896 1399 PRINTS Disease resistance protein signature 842 858 - -
Lapu3g03896 1399 PRINTS Disease resistance protein signature 277 291 - -
Lapu3g03896 1399 Pfam NB-ARC domain 188 404 IPR002182 GO:0043531
Lapu3g03896 1399 ProSiteProfiles TIR domain profile. 6 172 IPR000157 GO:0007165
Lapu3g03896 1399 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 149 IPR035897 -
Lapu3g03896 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 430 IPR027417 -
Lapu3g03896 1399 MobiDBLite consensus disorder prediction 1337 1363 - -
Lapu3g03896 1399 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 174 - -
Lapu3g03896 1399 Gene3D - 335 420 IPR042197 -
Lapu3g03896 1399 Pfam C-JID domain 1173 1334 IPR045344 -
Lapu3g03896 1399 SUPERFAMILY L domain-like 474 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03896 Lapu-Chr3 62475159 62482545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03896 837 942 WRKY Transcription Factor Family AT4G12020 32.710 7.13e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03896 - - vun:114178119 1830.84