Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03894 ATGTCTGCCACCGAACACAGAATAAGCTTGGACGCTGAGAAGCAGGGCCTTCTCAACCACCATACTGAGAAGCACTTCACCGCCGGCGAAGTCGTCCGCGACATCATCATTGGCGTTTCCGACGGCCTCACTGTCCCCTTTGCTCTCGCCGCTGGCCTCTCCGGCACCAATGCCACCTCCGCCATCGTTCTCACTGCCGGCATAGCTGAAGTTGCGGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCTGCGAAAAGTGAAGCTGATCACTACGCCAGAGAATTGGAAAGGGAACAAGAAGAAATAATCGCCGTGCCAGAAACTGAAGCAGCAGAGGTAGCAGAAATACTGGCTCAGTATGGGATAGAGGCACATGAATATGCACCAGTGGTTAATGCTCTCAGAAAGAATCCTCAAGCATGGCTTGATTTCATGATGAAGTTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCAGTGCACAGTGCAATGACAATTGCCATTGCTTATATAATGGGTGGTCTTGTTCCTCTTGTTCCTTACATGTTCATTCCAAGGGCATCAGAGGCAGTTGTGTTCTCAGTTGTCGTCACTTTGGCTGCATTGCTAATTTTTGGCTTTGCCAAGGGACACTTCACGGGCAATAGGCCTTTCAGAAGTGCTTTGGAAACAGCTCTGATTGGTGCCATCGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 744 0.5094 MSATEHRISLDAEKQGLLNHHTEKHFTAGEVVRDIIIGVSDGLTVPFALAAGLSGTNATSAIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELEREQEEIIAVPETEAAEVAEILAQYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRAVHSAMTIAIAYIMGGLVPLVPYMFIPRASEAVVFSVVVTLAALLIFGFAKGHFTGNRPFRSALETALIGAIASAAAFGMAKAFNP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03894 247 Coils Coil 83 103 - -
Lapu3g03894 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 245 IPR008217 GO:0005384|GO:0030026
Lapu3g03894 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Lapu3g03894 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03894 Lapu-Chr3 62462027 62466865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03894 1 243 Nodulin-like Gene Family AT3G43660 23.361 3.19e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03894 K22736 - gmx:100793585 414.846