Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03868 ATGGTGAGACCACACAGTACGTACCCCATGACATGCAAGAAAAGGTGGCGAATGGCTTTCACCGCAATCTCCTTCGTCAAGGCCCTTCACCATCTCTCCAAGAAAGCTCTTCATATTAAACCCCCAACCCTCTTCCGTTCCTTCTCCTACCTCGCTATCGATGTTGCTCCTCCACACGTGCCTTCCCCACGTGACAAACTTTCCAACGTTGACCCCAAACTGCTCAGTGACATGGTAGGGGACAAGAGACTCGATTATCTCACCCAATTTGGAGACGTCAAAGAACTCGCTGCACTTCTTGAAACCGATCTCAGGCGTGGCATAAGCGACGACAACGATGATATTGATCGCCGAAAACGCGTTTTCGGTGCCAACGTGTTCACGAAGCCTCCATCCAAAGGTTTTATTTCCTTTGTCCTTGAAGCTTTTAAGGATACCACTATCATCATCCTTTTGGCTTGTGCTGTGCTTTCCCTTGGCTTTGGAATCAAGCAACATGGGTGGAAGGAGGGGTGGTACGATGGAGGAAGCATCATATTGGCGGTTATTCTCGTTATTGTTGTGTCTTCCGTGAGTAACTTCAACCAATCTAGACAGTTTAAGAAGCTTTCTGCGAAGAGTGACAACATAGGAGTTGAAGTGGTACGAGGTGGTCGACGCCAGAGCGTGTCGATCTCTGAACTGGTGGTGGGTGACATTGTGTACTTGAAGATTGGTGACCAGGTTCCTGCGGATGGGTTGTTTTTGGAGGGGCATTCGTTGAAGGTGGACGAATCCAGCATGACGGGGGAGAGTGATCACGTGCATGTGAACGGTGGCACGAACCCTTTCTTGTTATCTGGCACAAAGGTCACTGATGGTTTTGCATACATGCTTGTAACTTCTGTGGGTATGAACACCGCCTGGGGTGTCATGATGGGTTCGATCACGAGAGAGCTTGATGAGGAGACACCTTTGCAAGTTCGTCTCAACAAATTGACTTCAGCAATTGGCAAGGTTGGGTTGTTGGTGGCTGCACTTGTTTTGGTGGCGTCTATGATACGATACTTCACGGGAATTACTAGAGATGATTTTGGGAACCGGGGGTTTGTTGGGAGAAAGACGAAGTTTGATGATGTTATGAATGCGGTTGTGGGGATTGTCGCTGCGGCTGTGACAATTGTGGTGGTGGCCATTCCAGAGGGGTTGCCACTGGCTGTTACGTTGACTTTGGCTTATTCCATGAAGAAAATGATTAGGGATAATGCCATGGTTAGGAGAATCTCTGCTTGTGAGACAATGGGGTCGGCAACAACAATCTGCACTGATAAAACTGGTACTCTTACAATGAATGAGATGAAGGTGACTGAGGTTTGGGTTGGGAAACAGGTAATAGCAGAAAATCGGTATTTGGCGCCGAGTTTAGTTCAATTGTTGAAAGAAGGAATTGAGTTGAATACCACTGCAAGTGTTTATCAACCCCAAGAAAATTCTCTGCCTGAAATTTCAGGTAGTCCTACTGAAAAGGCGTTGCTTTCTTGGGCGGTGATGGATTTGGGGATAGGCATTGATGAAATGAAGCAGCATTGTGAGATAATTCATGTGGAGACGTTTAACTCCGAGAAGAAGAGAAGTGGGATTCTGATGAGGGAGAAGAGAGGAAGCAACAGGGTGCATACACACTGGAAGGGTGCTGCTGAGATTATATTGGCCATGTGTTCAAATTACTATGACCACACAGGGGAGATCATGATCATGGGTGATGAAGAAAGAGTAGAAATTGAGAACATTGTGAAGGGCATGGCTACCAAAAGTTTGCGATGCATTGCCTTTGCCCAAAAGAGTTCCAACGGGCAGGTCTGCGGAGACATTGAAAAGCTTGAAGAGTCGGGACTAACCTTGTTGGGGATACTTGGACTGAAAGACCCTTGTAGGCCAGGAGTTAAAGCAGCAGTTGAGTCCTGCAAGAAAGCTGGAGTGAAGATCAAGATGATCACAGGAGATAATGTGCACACAGCGAGGGCCATAGCCTCTGAATGCGGGATTCTGGATCCTAATGAAGAATTCGATGAAGAAGCAGTTGTTGAAGGCTTTCAGTTCAGAAATTACTCGCCTGAGGAGAGAATGTATAAAATTGATAGAATCAGAGTCATGGCAAGGTCATCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCACAAGGGTCACGTGGTGGCAGTTACAGGTGATGGCACAAACGATGCACCTGCCCTGAGTGAAGCTGATATTGGACTTTCCATGGGAATACAGGGCACTGAAGTGGCAAAGGAGAGCTCAGACATTGTTATCCTTGATGATAATTTCTCTTCTGTGGTCACAGTACTACGATGGGGAAGATGTGTGTACGTAAACATCCAGAAGTTCATTCAGTTTCAGCTCACAGTTAACATTGCTGCACTTGTCATAAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTACAGCTGTGCAGCTTTTGTGGGTTAACCTGATAATGGATTCTCTTGGAGCCTTGGCCTTGGCCACTGAGCAACCCACTAATGATCTCATGAAGATGGCACCTGTAGGGAGAGTTGACCCACTTATAACTAGAGTCATGTGGAGGAACCTCATTTCACAGGCATTATATCAAGTGCTTGTATTACTGATTTTGCAATTCAAGGGAAGATCAATCTTTGATGTCAGTGAGAAGGTGAAGAACACCCTTATTTTCAATGCTTTTGTCCTCTGCCAGGTCTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATCTTCGAGGGGCTTGGTAAAAATAAGTTGTTCATAGTAATTGTGGGCCTAACTGTAGTTCTTCAGATAGTGTTAGTTGAATTTCTGAAGAAGTTTGCCAACACTGAGAGATTGACCTGGGGCCAATGGGGTGCTTGTGTTGGCATTGGAGTTTTGTCTTGGCCAATTTGCCTGCTTGTGAAGTGTATCCCGGTTGGTACCAACAAGTAG 2994 0.4596 MVRPHSTYPMTCKKRWRMAFTAISFVKALHHLSKKALHIKPPTLFRSFSYLAIDVAPPHVPSPRDKLSNVDPKLLSDMVGDKRLDYLTQFGDVKELAALLETDLRRGISDDNDDIDRRKRVFGANVFTKPPSKGFISFVLEAFKDTTIIILLACAVLSLGFGIKQHGWKEGWYDGGSIILAVILVIVVSSVSNFNQSRQFKKLSAKSDNIGVEVVRGGRRQSVSISELVVGDIVYLKIGDQVPADGLFLEGHSLKVDESSMTGESDHVHVNGGTNPFLLSGTKVTDGFAYMLVTSVGMNTAWGVMMGSITRELDEETPLQVRLNKLTSAIGKVGLLVAALVLVASMIRYFTGITRDDFGNRGFVGRKTKFDDVMNAVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMIRDNAMVRRISACETMGSATTICTDKTGTLTMNEMKVTEVWVGKQVIAENRYLAPSLVQLLKEGIELNTTASVYQPQENSLPEISGSPTEKALLSWAVMDLGIGIDEMKQHCEIIHVETFNSEKKRSGILMREKRGSNRVHTHWKGAAEIILAMCSNYYDHTGEIMIMGDEERVEIENIVKGMATKSLRCIAFAQKSSNGQVCGDIEKLEESGLTLLGILGLKDPCRPGVKAAVESCKKAGVKIKMITGDNVHTARAIASECGILDPNEEFDEEAVVEGFQFRNYSPEERMYKIDRIRVMARSSPFDKLLMVQCLKHKGHVVAVTGDGTNDAPALSEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYVNIQKFIQFQLTVNIAALVINFVAAVSSGKVPLTAVQLLWVNLIMDSLGALALATEQPTNDLMKMAPVGRVDPLITRVMWRNLISQALYQVLVLLILQFKGRSIFDVSEKVKNTLIFNAFVLCQVFNEFNARKLEKKNIFEGLGKNKLFIVIVGLTVVLQIVLVEFLKKFANTERLTWGQWGACVGIGVLSWPICLLVKCIPVGTNK* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03868 997 SUPERFAMILY HAD-like 432 840 IPR036412 -
Lapu3g03868 997 FunFam Calcium-transporting ATPase 187 310 - -
Lapu3g03868 997 Gene3D - 444 636 IPR023299 GO:0000166
Lapu3g03868 997 NCBIfam calcium-translocating P-type ATPase, PMCA-type 85 993 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lapu3g03868 997 SMART Cation_ATPase_N_a_2 92 163 IPR004014 -
Lapu3g03868 997 FunFam Calcium-transporting ATPase 444 636 - -
Lapu3g03868 997 SUPERFAMILY Calcium ATPase, transduction domain A 212 307 IPR008250 -
Lapu3g03868 997 Pfam haloacid dehalogenase-like hydrolase 431 750 - -
Lapu3g03868 997 Pfam Cation transporting ATPase, C-terminus 821 990 IPR006068 -
Lapu3g03868 997 Gene3D - 431 781 IPR023214 -
Lapu3g03868 997 PANTHER CATION TRANSPORTING ATPASE 67 993 - -
Lapu3g03868 997 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 992 IPR023298 -
Lapu3g03868 997 Pfam Cation transporter/ATPase, N-terminus 91 158 IPR004014 -
Lapu3g03868 997 NCBIfam HAD-IC family P-type ATPase 378 477 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g03868 997 NCBIfam HAD-IC family P-type ATPase 707 818 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g03868 997 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 440 641 IPR023299 GO:0000166
Lapu3g03868 997 SFLD C1.7: P-type atpase like 416 789 - -
Lapu3g03868 997 PRINTS H+-transporting ATPase (proton pump) signature 587 605 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g03868 997 PRINTS H+-transporting ATPase (proton pump) signature 736 752 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g03868 997 PRINTS H+-transporting ATPase (proton pump) signature 768 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g03868 997 FunFam Calcium-transporting ATPase 631 781 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 629 640 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 760 772 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 257 271 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 651 661 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Lapu3g03868 997 PRINTS P-type cation-transporting ATPase superfamily signature 736 755 - -
Lapu3g03868 997 SFLD p-type atpase 416 789 IPR044492 -
Lapu3g03868 997 FunFam Calcium-transporting ATPase 753 995 - -
Lapu3g03868 997 Pfam E1-E2 ATPase 212 413 - -
Lapu3g03868 997 Gene3D - 141 986 - -
Lapu3g03868 997 Gene3D - 112 310 - -
Lapu3g03868 997 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03868 Lapu-Chr3 62233140 62236174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03868 14 993 Primary Pumps ATPases AT3G22910 64.395 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03868 K01537 - gmx:100784119 1612.05