Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03846 ATGGATGAAGGGTTCTTGCTCGAATGGCACACTGCTTCGTATTGTGTTCAGTGCGAGGCTAGTGATGGAATCTGTGGCTACAGTAACACCGAGAAGGAGGTGCTGTGCTTTTGCAAGGATGGAAGTACAAGGAGCAGTACATGTGATGGTTTACTAATAGCTGGAGGAATTGGTGCACTGCTGACATGCATCGCACTTTATATTTTTAGACGAAAATTGTCACCAATTTTGTCAGAAATTCGGCAGGCTAAAAGGATTGATCGAGAAATTGAGGCCTTCATCAGAAATAATGGACCACTTCCCATAAAAAGATACTCATATTCAGATATCAAGAAAATGACCAATTCTTTTGAATCCAAACTGGGACAAGGTGGTTATGGTCAAGTGTATAAAGGAAATTTATGCAACAAATCTCCCGTGGCTGTGAAGCTATTGAATGCTTCCAAGGGAAACGGGGAAGAATTTATCAACGAGGTTATAAGCATCAGTAGAACATCCCATGTAAATATTGTTAATCTCCTTGGTTTCTGTCTTGAAGGCAAGAAGAAAGCTATTATATACGATTTTATGCCAAATGGATCACTGGAAAAATATATTCACAACAAGAATTTGAAAACTGATCCACCTTTGAGTTGGGAAAGACTACACCACATTGCAGAAGGAATAGCCAAAGGATTGGAGTACTTGCACAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTCTGCCCTAAAATCTCTGATTTTGGGATGGCCAAGCTCTACTCAAACACACAAAGTATCATATCTATGTATGACGCTAGAGGAACAGTAGGGTATATAGCTCCAGAGGTGTGGAACAGAAACTTTGGAGGGGTGTCATATAAGTCTGATGTTTATAGTTATGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAGTATCAGCACTGAAGCAAGCCATTCAAGTGAGACATATTTTCCCCATTGGATATACAAACATGTTGAGGTGGGAAGAAATTTAGAATGGCATGAAGGTATGACCCCAGAAGAAAATGAAATTTGCAAGAAAATGATTATTGTGGGATTATGGTGCATACAGACAATTCCTTCTGACAGGCCTGCTATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCACGGATCAGTTGCAAATTCCACCTGAGCCATTCATATTTACTCCTATGAAAAATGAAGTGGATATTTGCACCACTAGTACCTTTCCATCCATCCATGTAGCTATGACCACCCCTTCCTCCTTCTTTGCATCCACACTCGCCCTTGCCACTTTCTTCTTAGCAACTTTGCCACAATCCTACTCTCAACAAAACACCACCTACTCTATTTGCAGCCAATCTTTCAGTTGTGGAACTCTCACAAACATATCCTATCCTTTCTGGGGAGGGAACCGACCCCAGTTTTGTGGCCGCAATGGCTTCAAGCTCACGTGCATGCATGACCAAAACACTTCGCTTCAACTTGGTTCCCAAAAGTTCCATGTACTTCACATTAACCAAACGGCTTCCACCATGAGAATGGTGCGAACAGACCTTGTCTATGATCGCTGCTCTTCCAATTTCACCAACACTTCTCTCAGTTCCAGTCACTTTACTTTGCTCCCCACTGTTCAGAATGTCACTGTCTTCTACCAATGCCCCTCTCAGGATTCTGTTGGGGGAAACAGCTTTACTTGCCAGAATGATACTAATAAACACGCTTTCTATGTGGTCAATGGAACTCAGCTGAAGCAGTTCCCAGGCCTTCAGAAGTGCGGGATTAGCGTTCTCCTGCAAGTTTCACAGGGTGTTGTTTGGGATTCTAAGAATGGAATTCAGGCGCTGAAGAACGCGTTGGATCAAGGGTTTGATGTGAAGTTTGATGCAGAGTGGAGTTCTCAGTGTACAGCGTGCAGGGATTCTGGAGGAGCATGTGGAACGAATGAGAATGATTCGGCTCAGTTTTCTTGTTTTTGCTCGGGTGGAACTCGTGGTTCAGTGTGTTCTACCCACAAAAGTTTCGTTGGTACTGGATTTGCACTACCTCTAATCGCTGTCATCATATGCCGCAACAAAGAAAGAATTTGGAAATTTATATTAATACAAATCGGCAAGATAAAAAAGAATGATCGTGTTATAGAAGCCTTCCTTGAAAGCCAAGGTTCTATGGGTCTAAAGAGATACAGTTTCTCTGATGTCAAGAAAATGACCAACTCCTTCAAAATTAAAGTGGGGGAAGGTGGTTATGGATCTGTATACAAAGGAAAGTTACTCAATGGTCGCTCAGTGGCAGTGAAGATACTGAACGAGTCAAAGGAGAATGGCGAAGAGTTTATCAATGAAGTTGCTAGCATAAGCAAAACATCCCATGTTAACATTGTCTCTCTCCTTGGATTTTGCATAGAAGGAAGCAGAAAAGCCCTCATCTATGAGTTTATGTCCAATGGTTCACTCGAGAAGTACATTCACAAGAAAGCAGCAGAAAAAAATAAAACTTCTACTCCACCCTTGAGTTGGGACAGATTGAACCAGATTGCAATAGGCATAGCTCGAGGACTTGAGTACTTGCATAAAGGATGCAACACTCGGATTCTGCATTTTGACATTAAGCCACATAACATCCTTTTGGACGAAACTTATCGCCCAAAGATATCAGATTTTGGACTTGCTAAGCTCAGCACAAGAGATGAAAGCATTATATCAATGTCAAATGCTAGAGGGACAGTAGGGTATGTGGCTCCTGAAGTGTTCAATAAAAGTTTTGGAGGTGTTTCACACAAGTCTGATGTCTACAGCTATGGAATGATGCTGCTAGAAATGGTTGGAGGACAGAAGAACATCAACGTGGAAGCTAGTCGCTCAAGCGAACTATATTTCCCACAGTTGGTTATTTACAAGAAGCTTGAGCAGGGCAATGATTTGGCTCTTGATGGGATATTGTCTGGTGAGGAAAATGAGATAGCAAAGAGAATGACTATGGTGGGTTTGTGGTGCATTCAGACAATTCCTTCTCACAGACCTACCATTAGTAGAGTGATTGACATGTTGTTAGGTAGTGTGGATTCCTTGGAAATGCCACCAAAACCTTTCCTCTCTTCTCCTCCAAGATCAGTCACAGATTTTTGCACTGCAATATCCGAATCATTTGATAGTGTCAGCAGTTCATAG 3198 0.4174 MDEGFLLEWHTASYCVQCEASDGICGYSNTEKEVLCFCKDGSTRSSTCDGLLIAGGIGALLTCIALYIFRRKLSPILSEIRQAKRIDREIEAFIRNNGPLPIKRYSYSDIKKMTNSFESKLGQGGYGQVYKGNLCNKSPVAVKLLNASKGNGEEFINEVISISRTSHVNIVNLLGFCLEGKKKAIIYDFMPNGSLEKYIHNKNLKTDPPLSWERLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLYSNTQSIISMYDARGTVGYIAPEVWNRNFGGVSYKSDVYSYGMMILEMVGGRQSISTEASHSSETYFPHWIYKHVEVGRNLEWHEGMTPEENEICKKMIIVGLWCIQTIPSDRPAMSRVVEMLEGSTDQLQIPPEPFIFTPMKNEVDICTTSTFPSIHVAMTTPSSFFASTLALATFFLATLPQSYSQQNTTYSICSQSFSCGTLTNISYPFWGGNRPQFCGRNGFKLTCMHDQNTSLQLGSQKFHVLHINQTASTMRMVRTDLVYDRCSSNFTNTSLSSSHFTLLPTVQNVTVFYQCPSQDSVGGNSFTCQNDTNKHAFYVVNGTQLKQFPGLQKCGISVLLQVSQGVVWDSKNGIQALKNALDQGFDVKFDAEWSSQCTACRDSGGACGTNENDSAQFSCFCSGGTRGSVCSTHKSFVGTGFALPLIAVIICRNKERIWKFILIQIGKIKKNDRVIEAFLESQGSMGLKRYSFSDVKKMTNSFKIKVGEGGYGSVYKGKLLNGRSVAVKILNESKENGEEFINEVASISKTSHVNIVSLLGFCIEGSRKALIYEFMSNGSLEKYIHKKAAEKNKTSTPPLSWDRLNQIAIGIARGLEYLHKGCNTRILHFDIKPHNILLDETYRPKISDFGLAKLSTRDESIISMSNARGTVGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGQKNINVEASRSSELYFPQLVIYKKLEQGNDLALDGILSGEENEIAKRMTMVGLWCIQTIPSHRPTISRVIDMLLGSVDSLEMPPKPFLSSPPRSVTDFCTAISESFDSVSSS* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03846 1065 FunFam PR5-like receptor kinase 190 399 - -
Lapu3g03846 1065 Gene3D Transferase(Phosphotransferase) domain 1 190 400 - -
Lapu3g03846 1065 Gene3D Transferase(Phosphotransferase) domain 1 823 1034 - -
Lapu3g03846 1065 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Lapu3g03846 1065 ProSiteProfiles Protein kinase domain profile. 748 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03846 1065 Pfam Wall-associated receptor kinase galacturonan-binding 461 526 IPR025287 GO:0030247
Lapu3g03846 1065 SUPERFAMILY Protein kinase-like (PK-like) 97 389 IPR011009 -
Lapu3g03846 1065 FunFam PR5-like receptor kinase 823 1038 - -
Lapu3g03846 1065 Pfam Wall-associated receptor kinase C-terminal 1 41 IPR032872 -
Lapu3g03846 1065 Pfam Wall-associated receptor kinase C-terminal 577 671 IPR032872 -
Lapu3g03846 1065 Gene3D Phosphorylase Kinase; domain 1 79 189 - -
Lapu3g03846 1065 Gene3D Phosphorylase Kinase; domain 1 713 822 - -
Lapu3g03846 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lapu3g03846 1065 ProSiteProfiles Protein kinase domain profile. 115 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03846 1065 ProSitePatterns Protein kinases ATP-binding region signature. 754 776 IPR017441 GO:0005524
Lapu3g03846 1065 PANTHER RUST RESISTANCE KINASE LR10-RELATED 87 405 IPR045874 GO:0004672
Lapu3g03846 1065 FunFam serine/threonine-protein kinase PBS1-like 717 822 - -
Lapu3g03846 1065 SMART serkin_6 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03846 1065 SMART serkin_6 748 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03846 1065 SUPERFAMILY Protein kinase-like (PK-like) 728 1026 IPR011009 -
Lapu3g03846 1065 ProSitePatterns EGF-like domain signature 1. 667 678 IPR000742 -
Lapu3g03846 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 874 886 IPR008271 GO:0004672|GO:0006468
Lapu3g03846 1065 Pfam Protein kinase domain 753 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03846 1065 Pfam Protein kinase domain 118 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03846 Lapu-Chr3 62034662 62045329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03846 1 403 Receptor kinase-like Gene Family AT5G38260 48.910 3.26e-122 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu3g03846 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03846 - - vra:106766588 1139.79