Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03803 ATGGAAAACCAAAACGGTCTCAAACTCCGAATCACTCGCATGTTCAGATCCTCCTTCGCTTCCTGCCGAACCCGTCACATAGCTGATGTAATGGAAAAAGCAGTGTTTGCACCACCCAACCCCATTGAACCACCCTCCCCCAAAACCTCACCCTTTCCTCCCTCTTGTAGGCCCGAAACAATCAACGACACTTGCATTCTGTCCTTTAACGATTCTCATTCTCTCTCTCGGCGCAAAATCTCACACTTTTCATCACCTTTTCTCTGGACTAACAACACCACCACCGCCACCAACAACAGCCTCAACCTTAACCTCGGTGTCATGTCCTGCCCCCCCGCTTCTCCGAACGTTTCCCTCAACACAATCCACGAACACGATTTCATTTTCCACGACAAAACCAAGGCTTCAGCTTCAACAAAGAACGTCAGGACCAAGAAGAAGAAGAAGAAGAAGAGACGTGCCCAGAAGAAAAGGGACTTTTTCCCCTTCAATTCATGCTCCAAAGACACCAGCTTTGGTGGCTACTGGTGGTATAGCAGCGACGAAGACGATGAAACCGACACCCTTTTCTCCTCCAAGAGCCTCTCCTCCGATTCCTCTATGTCCCGGCGCCGGCGCCGGAAATCTGACCGGAGCTCTGACATGGGTGTCCTGCCGCTGCACGGGAAGGTTAAGGACACGTTTGCGGTGGTGAAGCGCTCGAGCGACCCTTACAACGATTTCAGGACTTCAATGCTGGAGATGATCGTGGAGAAGCAGATATTTTCGCCAGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCTCTGAATTCGTATCATCATCATAAGATCATTGTCCAAGTCTTCACGGAGATTTGGGAGGCTCTATTCTCTGACTGGTTTTGA 888 0.4989 MENQNGLKLRITRMFRSSFASCRTRHIADVMEKAVFAPPNPIEPPSPKTSPFPPSCRPETINDTCILSFNDSHSLSRRKISHFSSPFLWTNNTTTATNNSLNLNLGVMSCPPASPNVSLNTIHEHDFIFHDKTKASASTKNVRTKKKKKKKRRAQKKRDFFPFNSCSKDTSFGGYWWYSSDEDDETDTLFSSKSLSSDSSMSRRRRRKSDRSSDMGVLPLHGKVKDTFAVVKRSSDPYNDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03803 295 Pfam Transcriptional repressor, ovate 234 291 IPR006458 -
Lapu3g03803 295 MobiDBLite consensus disorder prediction 191 218 - -
Lapu3g03803 295 NCBIfam uncharacterized plant-specific domain TIGR01568 228 291 IPR006458 -
Lapu3g03803 295 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 126 292 IPR038933 GO:0045892
Lapu3g03803 295 ProSiteProfiles OVATE domain profile. 230 289 IPR006458 -
Lapu3g03803 295 MobiDBLite consensus disorder prediction 199 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03803 Lapu-Chr3 61497597 61498774 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu3g03803 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03803 - - gmx:100776613 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03803 3 61497597 61498774 Lapu3g03803 3 61497597 61498774 ECH