Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03799 ATGTATAGATCATTTCTGAAATGTGAAGATCCAAAAGGAGTTGTAGGATGTGGGACAATCAGGAAATACAGGACTCGTTCTCACAAAGTGAAGGACAAGACAAAAGTGCAGAAGAGAAGTGAAAACTTGGAGACATCCTTGATCAACAAAAGATACGAAGAGGAGAAGAAGGTCGTCAAAGAATGTCATGGAAAACTCATTGGTCCATCATCTCTGCAGCTCACACGGGTCTCCGGAGAGGATCATAGGTGGAACAATATGCAAGATTCGTGGTCTAGAGATATTATATGTGAAGGAAAGTCCGAAGATATTGCAAAAGGTATTTTAAATGGAGCTCTTGGTCTGCAAGATTCTCTAAGCATGCTTCGCAAGCTGCAAGAGGAGGCTTCACAACATACAGCTCCTTTTGGGAGAAAACAGACTAAGAAACCAGAAAGAGACAGAATTGATGGAAACGAGATTGGTAGAAGGCAGGCTAATCCATCAAGGGAACAAAGTAATCCAAAGGTGTTTCAAAGACCACAGCCTTCTGCTGGTTGTTCTTCAAGTAACTGCAAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTTGGCAAAATATGTTTCCAAAGACCATGGAAGGATTTGATTCAGGTTCAGAAACTTGTTCTACAAGCACAAGCCAATGTTCTGGGGTCAGGACTAACAGTCTTTCTGATCCTTCTTTATCAGTAATAGCTTCAAAGATTGAAAGAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTGGAAGAAGCCCCCTCAAAATCATTTCCAGCTGTTGAGCAGAAACTGTTGGATGGTGCGACAGATATGTCAAAGGTCAGAAAGAATGATTGTATAGCTGAGACGGTTAATCCAGAATTAAAAGCCCTGAGGGAAACTCTTGACACGAAGCATTTCAAAGGTATTTTGAAGGAGAGTTTTGTCAGAGATTCTAAGCTTCATGTGCATCATTTCAATGATATCAGTTCCAAGCAGTTTGGCGATTTATCTCGCATTGCACTTATGAAACCTCAATGTACTCTTTTCCATGAATCAGAAAAAAGTACCTACATTCCAGTTCTTCCAAAAGAGTTAACAAAAGTGAGAGGAGAAATACCCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAAAATGGGAAAAGAAATGGAAAAGGGTATTAGGAAACGGCTTAGCAGAGAGGAAAGACCTAATTTTCGCGAAGAGGTTATTAAACTGGATGCAAAAGGAAGCAATCCTGTTGAAGAATACTCAGGTAAGGTAAAACCGTATTGTCACATTGGTCACACATCACATGTAAATGAGACAACTGATAGAAAATGGAAGGTACAACACACTAGTAGAAAACAGCCAGAAAAGGATATCTCACAACTTACGAGTGTGGCAAAGCATCAGTACCAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGCGGATCCAGAATCGACAAGAATGAGATTTCCTTCCTAAAGAGCACAAATTTAAACAACATCTCCACTCAAAAAACTAGGAATTCCAAGGACCTTAATGTTGAGACAAAAAAAAAGAACTCCGTGGTAGACTCCTTAACAGGTAGAAAGAATCAGATAAAAAAACAAAGCCCTGTTGCTGAGCCAGAACCAGCTAAACTAACTGTTGAACAAATCAGGCAGAGAGAAAAGAAGAAAAATTACCCTGAGATCAGAATCGTCAGTAGAGTAGAAGACGAGCTCCTGATGGTGTGTGAAGCAGATGCCTTCATAAAGATTGGAGAAAAACGCAAGCTGAGGAAGAGTTATTCAGGCGATGAGCTCATTATGCTGCTCAAATCTGAACATAAAAATGCTTATAGTATTGAAGCCGACAAAGAGGGGACAGAGCTGAAACATTTTCTTCTAACCAGTCCATCATTCATAGGACATGCAAAGAAGCTCTTCAATCTTGATGTGGATTGTCCCAACAGCCTACAAAAGGATGAAAATATTTACAGCGTAGCCAATCTGAGGCTTTATTTGGATTGCGCTTACGAACTGACTGAACGTAAAAGTTTTCAAGAGTCTCAAGTAGTTCGTTCCCTCTTGCTAGCACGTGGGGGGAACTCAAGATTGCACATCTCCTTAGGCAGGTTGGTGGAAGAAATCTGTGATGGAATTGAGAATCTAAAATTTTACAGAGAAGATTATGATTGTGGGAAGGAAGCTTTTGCAGAGAATGATGTGTTTGCAATGATGGAGAAAGACATGAAGAGCAATGGAGAGATAAATGGAATGTGGGAGAGTTGTTGGTGGCCAGGCTTTTGTGCAGATGAGGCTCAACTGGTTGTCAATAAAATAGAGAGCCTGCTTATAACTGGATTAATAGAGGAGCTTGTAATAAATTTA 2403 0.4028 MYRSFLKCEDPKGVVGCGTIRKYRTRSHKVKDKTKVQKRSENLETSLINKRYEEEKKVVKECHGKLIGPSSLQLTRVSGEDHRWNNMQDSWSRDIICEGKSEDIAKGILNGALGLQDSLSMLRKLQEEASQHTAPFGRKQTKKPERDRIDGNEIGRRQANPSREQSNPKVFQRPQPSAGCSSSNCKEELKKVIKESLVWQNMFPKTMEGFDSGSETCSTSTSQCSGVRTNSLSDPSLSVIASKIERGPSLVFKLMGLEEAPSKSFPAVEQKLLDGATDMSKVRKNDCIAETVNPELKALRETLDTKHFKGILKESFVRDSKLHVHHFNDISSKQFGDLSRIALMKPQCTLFHESEKSTYIPVLPKELTKVRGEIPSSKTIKHRKGSSSTKMGKEMEKGIRKRLSREERPNFREEVIKLDAKGSNPVEEYSGKVKPYCHIGHTSHVNETTDRKWKVQHTSRKQPEKDISQLTSVAKHQYQREIPSTKLRKLKSGSRIDKNEISFLKSTNLNNISTQKTRNSKDLNVETKKKNSVVDSLTGRKNQIKKQSPVAEPEPAKLTVEQIRQREKKKNYPEIRIVSRVEDELLMVCEADAFIKIGEKRKLRKSYSGDELIMLLKSEHKNAYSIEADKEGTELKHFLLTSPSFIGHAKKLFNLDVDCPNSLQKDENIYSVANLRLYLDCAYELTERKSFQESQVVRSLLLARGGNSRLHISLGRLVEEICDGIENLKFYREDYDCGKEAFAENDVFAMMEKDMKSNGEINGMWESCWWPGFCADEAQLVVNKIESLLITGLIEELVINL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03799 801 MobiDBLite consensus disorder prediction 387 407 - -
Lapu3g03799 801 MobiDBLite consensus disorder prediction 374 407 - -
Lapu3g03799 801 MobiDBLite consensus disorder prediction 126 183 - -
Lapu3g03799 801 PANTHER OS01G0228800 PROTEIN-RELATED 1 799 - -
Lapu3g03799 801 MobiDBLite consensus disorder prediction 158 183 - -
Lapu3g03799 801 MobiDBLite consensus disorder prediction 138 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03799 Lapu-Chr3 61461130 61464049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03799 624 798 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 29.444 8.88e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03799 - - var:108346558 1230.31