Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03770 ATGGGGAGAGCCATTAGGTGGTTGAAGGGGTTGTTTGGGATAAAGACAGACAAAGAGCGCAAAGAAAATGCAAATCCTGGCACCAAATGGTGCCACTCAGACAGAGATTCCAGAGGTTTATGTCATAATCCTACCACCATTCCTCCCAATATTTCACCTGCTGAGGCTGCTTGGCTACAATCCTTCTACTCAGAAACTGAGAAGGAGCAGAACAAGCACGCCATTGCAGTTGCAGCAGCCACTGCAGCAGCTGCTGACGCCGCGGTGGCTGCAGCTCAGGCTGCCGTGGCAGTGGTTAGGTTAACCAGCCATGGCAATGGCAGAGACACCATGTTTGGTGGTGGACAAGAAAGGTTGGCCGTTGTCAAGATTCAAACTGTGTTTAGAGGATACTTGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTGAAGTTACAAGCACTGGTGAGAGGGTACTTAGTGCGGAAGCAAGCAGCAGCAACCCTGCACAGCATGCAAGCTCTAATTAGAGCTCAAGCCACAGTAAGGTCTAAGAAATCTGGCGGACTCGTGAGCACAAAGAATGAAGCACACAGGTTTCAAACACAAGCGCGAAGATCCATGGAGCGATTTGATGACATAAAGAGTGAGTACATAGCTCCCATCCACAGCAGAAGGCTATCATCTTCCTTTGATGCCACAATGAATAATGCAAACAACAGTGTTGATGGAAGCCCCAAAATAGTAGAAGTGGACACTGGCAGGCCAAAGTCAAGGTCTCGCCGGAGCAACACATCAATGTCAGACTTTGGCGATGATCCGTCATTTCAGACGCTTCCTTCTCCTCTCCATTTCACTCATTTATCCATACCAAACCACAGGACTTTCCACGACACAGAGTGGGGCTTAACGGGAGAGGAGTGCAGATTCTCTACAGCACAAAGCACTCCACGCTTCACCACCAACTCTTGTAGTTGTGGCTCTCTTCTTGTTGCACCTATGACACCTAAAAGTGTTTGTACCGAAAATTTCTTCTATGGGCAGTACCACAATTTTCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAACAGCGTCCGGATCCTGGTTCAAAGAAGAGGCTTACCCTGAATGAGATGATGGAGTCTAGGAGTAGTTTAAGTGGGGCTAGAATGCAAAGGTCCTGCTCACAGATTCAGGAAGCAATTAATTTTAAGAATGCTGTGATGAGTAAGCTTCAGAAGTCCACAGAATTTGGTAGGGAGACAACACCAACTTTTCCAACCAAAGGAGGTGGTGATTGGTGA 1317 0.4753 MGRAIRWLKGLFGIKTDKERKENANPGTKWCHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNGRDTMFGGGQERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSGGLVSTKNEAHRFQTQARRSMERFDDIKSEYIAPIHSRRLSSSFDATMNNANNSVDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQTLPSPLHFTHLSIPNHRTFHDTEWGLTGEECRFSTAQSTPRFTTNSCSCGSLLVAPMTPKSVCTENFFYGQYHNFPNYMASTQSFKAKLRSHSAPKQRPDPGSKKRLTLNEMMESRSSLSGARMQRSCSQIQEAINFKNAVMSKLQKSTEFGRETTPTFPTKGGGDW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03770 438 MobiDBLite consensus disorder prediction 254 269 - -
Lapu3g03770 438 MobiDBLite consensus disorder prediction 231 269 - -
Lapu3g03770 438 MobiDBLite consensus disorder prediction 419 438 - -
Lapu3g03770 438 SMART iq_5 116 138 IPR000048 GO:0005515
Lapu3g03770 438 SMART iq_5 139 160 IPR000048 GO:0005515
Lapu3g03770 438 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
Lapu3g03770 438 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Lapu3g03770 438 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Lapu3g03770 438 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Lapu3g03770 438 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Lapu3g03770 438 Gene3D - 118 159 - -
Lapu3g03770 438 Pfam Protein of unknown function (DUF4005) 311 395 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03770 Lapu-Chr3 61142436 61145520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03770 1 395 IQD Protein Family AT3G16490 53.383 4.32e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03770 - - gmx:100800892 674.855