Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03762 ATGGAGGAGGACGAACTACTCCAACGATTCAACTCGGAGCTCACGTCCACCAGCTCCGGCTCCGTCATTTCCTCCACACTCAGCACCGAAGATTTTCGGAACCTCAACAGCTCCGGTGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCAGTTGCTGTCACCGAAGCGGTACTCGCACCGCCGCTGCTCCACCGCTCCGGGCTCAATGGCTGCGAGTCGCCGGCTGTGAGGGAGAAGTGCGTCGGAAGGAGTAACAAGGGACTGAATTGGGGACACACTTCGGTGATTGGGAGAAGGAAAGAGATGGAGGACGCCGTCGCCGTTATTCCCGGATTCATGTCTCGCACGTGCGATCACGTCGGCGGATGTACCGCTCCCGGCTCCAGATCCTCCGGCGAGATAGCTCCCGTTCATTTCTTTGGCGTTTACGACGGCCATGGTGGCTCACAGGTAGCTAAGTTCTGTGCTAAGCGGATGCACGATGTTATAGCAGAGGAGTGGAATCGAGAAATGGTAGGTGGAGCTGAGTGGCAGAGAAGATGGGAAGCCGTATTTGCTAACAGTTTTGAGAGAACTGACAATGAAATCCTATCAGACGCCGTTGCACCTGAAATGGTAGGATCTACTGCTTCTGTGGTGGTTCTATCTAGCTGCCAAATTATTGCATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACTATCCCCTTGTCAGTGGATCAAAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTAAGACCATGGATTATTCCGGTGCCTGAGATAACTTTCACGGCACGAACAGAGGAGGATGAGTGCTTAGTTTTGGCAAGTGACGGACTCTGGGATGTAATGAGCAATGAAGAGGTTGGAGAAGTGGCACGCCACATTCTTAGAAGACGCCGCAGATCCTTGTCAGTGGAGGAAACATCTCCGGCACAAGTTGTTGCCGACAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCGAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1176 0.5111 MEEDELLQRFNSELTSTSSGSVISSTLSTEDFRNLNSSGDISSISSGSGEIPPVAVTEAVLAPPLLHRSGLNGCESPAVREKCVGRSNKGLNWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHVGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWNREMVGGAEWQRRWEAVFANSFERTDNEILSDAVAPEMVGSTASVVVLSSCQIIASNCGDSRVVLCRRTQTIPLSVDQKPDRQDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTEEDECLVLASDGLWDVMSNEEVGEVARHILRRRRRSLSVEETSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLIS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03762 391 FunFam Protein phosphatase 2C 51 85 385 - -
Lapu3g03762 391 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Lapu3g03762 391 SMART PP2C_4 84 375 IPR001932 -
Lapu3g03762 391 SUPERFAMILY PP2C-like 80 378 IPR036457 -
Lapu3g03762 391 PANTHER PROTEIN PHOSPHATASE 74 377 IPR015655 GO:0004722|GO:0006470
Lapu3g03762 391 CDD PP2Cc 94 377 IPR001932 -
Lapu3g03762 391 ProSiteProfiles PPM-type phosphatase domain profile. 92 377 IPR001932 -
Lapu3g03762 391 Gene3D - 82 387 IPR036457 -
Lapu3g03762 391 Pfam Protein phosphatase 2C 100 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03762 Lapu-Chr3 61051505 61059133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03762 93 387 PP2C-type Phosphatase Gene Family AT4G26080 50.794 8.47e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03762 K14497 - gmx:100793293 659.062