Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03749 ATGGAGAACACCTGGATCCTCACTTTTCACCTTCTTCTCCTCCTGCTCCATCCAAATGCAGCAAAAGGGGCCATTAGTGTAGGTGTCGGTGTTGGTGGGAGAGGTGGCATAGGTGTTGGCATTGGTATTGGCAATGGGGGTAGTGGTGGTAACACCCCAGGACCCTCTGGATCCTCAGTGCCTAACCTCAACAATGCTTTCACGGCCCTCCAGGCTTGGAAATCTGCCATCACTGATGACCCTTTGAAGATTTTGGACACCTGGGTTGGTCCCAATGTGTGTTCCTACAAAGGTGTCTTCTGCTCCAATTCTCAGGACGGCAATGGAATTGCCACAACAACATCAACTGACTCTTCTGTTGTTGCTGGAATAGATCTCAACCATGCAAATCTCCGAGGGACTCTTGTCAAAGAGCTCTCTTTGCTATCAGATATCACTCTTTTCCATCTCAACACCAACAGGTTTTCTGGCTCAGTTCCTGACTCATTCAGGGACCTGACTTCCCTCCAAGAGTTGGACATCAGCAACAACCAACTCTCGGGCCCCTTTCCCGCTGCCACTCTATCCATGCCAAGCCTCATCTACTTGGACCTCAGATACAACAACTTCTCAGGGCAACTTCCTGATGAACTCTTCAACAAGAAACTCGATGCCATATTCCTCAACAACAACAATTTTGGTGGTGAAATTCCAGAGAATCTAGGAAATTCACCTGCCTCGGTGATCAACTTGGCGAACAACAAGTTGAGTGGAGGCATCCCTTTTAGCTTTGGTTTCATGAGTTCAAGACTAAAGGAGATTCTCTTCCTTAACAACCAGTTAACAGGTTGCATTCCCGAAGGTGTAGGGATCTTCACTGAGATGCAAGTGTTGGATGTGAGTTTCAACTCTCTGATGGGCCATTTGCCTGACACAATGAGTTGCTTGCAGGACATAGAGGTTCTGAATTTGGGCCATAACAAGCTCTCAGGGGAATTATCTGATGTGGTGTGCTCCTTGAGAAGCCTATTAAATCTGACTGTTGCTTACAATTTCTTCTCTGGGCTGAGCCAGGAATGTTCAAGGCCATTCAATGTGGGGTTTGATTTCTCTGATAACTGTATCCCTGGAAGGAATATGCAAAGACCCCAACCAGAGTGTTCTGGGATCCCTGGAGGCAGTCTCAATTGCCTTAGAATCCCTGCTCCAAAGCCTCTCGTTTGTGCAACTCTGGCTGCAACTTTGTCTAAATACGCAAATTCACGTTCCTCTTCTCCCTGA 1260 0.473 MENTWILTFHLLLLLLHPNAAKGAISVGVGVGGRGGIGVGIGIGNGGSGGNTPGPSGSSVPNLNNAFTALQAWKSAITDDPLKILDTWVGPNVCSYKGVFCSNSQDGNGIATTTSTDSSVVAGIDLNHANLRGTLVKELSLLSDITLFHLNTNRFSGSVPDSFRDLTSLQELDISNNQLSGPFPAATLSMPSLIYLDLRYNNFSGQLPDELFNKKLDAIFLNNNNFGGEIPENLGNSPASVINLANNKLSGGIPFSFGFMSSRLKEILFLNNQLTGCIPEGVGIFTEMQVLDVSFNSLMGHLPDTMSCLQDIEVLNLGHNKLSGELSDVVCSLRSLLNLTVAYNFFSGLSQECSRPFNVGFDFSDNCIPGRNMQRPQPECSGIPGGSLNCLRIPAPKPLVCATLAATLSKYANSRSSSP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03749 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 57 396 - -
Lapu3g03749 419 PRINTS Leucine-rich repeat signature 309 322 - -
Lapu3g03749 419 PRINTS Leucine-rich repeat signature 169 182 - -
Lapu3g03749 419 Gene3D Ribonuclease Inhibitor 64 236 IPR032675 -
Lapu3g03749 419 FunFam Leucine-rich repeat extensin-like protein 1 67 236 - -
Lapu3g03749 419 Pfam Leucine rich repeat 148 203 IPR001611 GO:0005515
Lapu3g03749 419 Pfam Leucine rich repeat N-terminal domain 64 102 IPR013210 -
Lapu3g03749 419 Gene3D Ribonuclease Inhibitor 237 356 IPR032675 -
Lapu3g03749 419 SUPERFAMILY L domain-like 67 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03749 Lapu-Chr3 60944232 60946251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03749 61 392 Leucine-rich Repeat extension Gene Families AT3G24480 48.521 3.74e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03749 - - gmx:100786358 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03749 3 60944232 60946251 Lapu3g03749 3 60944232 60946251 ECH