Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03748 ATGAAGATCGAGGAACTGGACGACGCGGAGTGTAGTATAGACGAACAAGAGAAGTATGAGAGGCAGATTGTCAGCGTTGAAGTGAAGAGAGCGTTGGTGGGCGCAGGTGCTCGGATCCTGTTCTATCCCACACTCTTGTATAATGTGCTTCGTAACAAAATTGAAGCTGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTGTTGCTGGGCGCTGTTCCGTTCCCCAAAGATGTTCCTCATTTGAAGAACCTTGGTGTTGGTGGTGTGATTACTCTCAATGAGCCCTATGAAACCTTGGTGCCATCGTCGTTGTATCGGGCTCACGGGATTGATCATTTGGTAATTCCCACTAGAGATTATCTCTTTGCCCCCTCGATTGTTGATATCAACCAGGCTGTGCAGTTCATTCACCAGAATGCAACTTGCGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGTCGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATACAAGCATATGACACCTGCTGCCGCCCTAGAATATGTTCGGTCTCGACGACCTAGAGTGCTACTAGCACCATCGCAGTGGAAGGCTGTTCAAAACTATAACAAGCGCAGGCCTTGTCCTTTACCGTACTCCCCCTCTGGGGACGCAGTTCTTATAACCAAAGCGGATCTTGAAGGCTATCATAGCACATGTGATGCTGATATGGAGCTAGCTATTGTTCCCAAACTGCCAAGGACTATGCCCATGATCGCAAGATTATCTTGCCTGTTTGCATCCTTAAAAGTATCTGGTAGTAGTGTACCAATGATCAGGCGGCTGCCGGTTTCTGAGTCACGAGCCTGCTAA 849 0.4747 MKIEELDDAECSIDEQEKYERQIVSVEVKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSIVDINQAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPCPLPYSPSGDAVLITKADLEGYHSTCDADMELAIVPKLPRTMPMIARLSCLFASLKVSGSSVPMIRRLPVSESRAC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03748 282 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
Lapu3g03748 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Lapu3g03748 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Lapu3g03748 282 FunFam Dual specificity phosphatase domain protein 60 206 - -
Lapu3g03748 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Lapu3g03748 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Lapu3g03748 282 CDD PTPMT1 60 204 IPR044596 GO:0004721
Lapu3g03748 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Lapu3g03748 282 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 260 - -
Lapu3g03748 282 Pfam Dual specificity phosphatase, catalytic domain 84 203 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03748 Lapu-Chr3 60932176 60934918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03748 22 270 Protein tyrosine phosphatase (PTP) family AT2G35680 53.401 9.35e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03748 - - gmx:100817410 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03748 3 60932176 60934918 Lapu3g03748 3 60932176 60934918 ECH